STRINGSTRING
AT1G30920 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G30920" - F-box family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G30920F-box family protein (400 aa)    
Predicted Functional Partners:
AT5G65370
ENTH/ANTH/VHS superfamily protein (295 aa)
     
        0.438
RR23
Response regulator 23 (145 aa)
     
        0.438
AT5G59100
Subtilisin-like serine endopeptidase family protein (741 aa)
     
        0.438
AT5G56430
FBD-associated F-box protein (360 aa)
     
        0.438
AT5G53840
F-box/FBD/LRR-repeat protein (444 aa)
     
        0.438
AT5G52150
RING/U-box superfamily protein (200 aa)
     
        0.438
AT5G52140
RING/U-box superfamily protein (280 aa)
     
        0.438
AT5G48980
F-box/kelch-repeat protein (399 aa)
     
        0.438
AT5G41720
Uncharacterized protein (187 aa)
     
        0.438
AT5G41450
RING/U-box superfamily protein (164 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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