• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
AT1G30925 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G30925" - Putative F-box protein At1g30925 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G30925Putative F-box protein At1g30925; Phospholipase Cs; Its function is described as phospholipase C activity; Involved in intracellular signaling pathway, lipid metabolic process; Located in cellular_component unknown; Contains the following InterPro domains- F-box associated domain, type 3 (InterPro-IPR013187), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro-IPR000909), F-box associated interaction domain (InterPro-IPR017451); BEST Arabidopsis thaliana protein match is- F-box and associated interaction domains-containing protein (TAIR-AT1G33020.1); Has 1130 Blast hits [...] (374 aa)    
Predicted Functional Partners:
AT3G16020
F-box associated ubiquitination effector protein; Its function is described as phospholipase C activity; Involved in intracellular signaling pathway, lipid metabolic process; Located in cellular_component unknown; Contains the following InterPro domains- Phospholipase C, phosphatidylinositol-specific , X domain (InterPro-IPR000909), F-box associated domain, type 1 (InterPro-IPR006527); BEST Arabidopsis thaliana protein match is- F-box family protein (TAIR-AT1G32140.1); Has 386 Blast hits to 373 proteins in 2 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 386; Virus [...] (98 aa)
           
  0.833
PLC5
Phosphatidylinositol-speciwc phospholipase C5; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes (578 aa)
           
  0.830
AT3G57770
Protein kinase superfamily protein; Its function is described as protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; Involved in protein amino acid phosphorylation; Located in cellular_component unknown; Expressed in shoot, stem; Contains the following InterPro domains- Protein kinase, catalytic domain (InterPro-IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro-IPR020635), Serine/threonine-protein kinase-like domain (InterPro-IPR017442), Serine/threonine-protein kinase, active site (InterPro-IPR008271), Protein kinase-like doma [...] (269 aa)
           
  0.771
PLC9
Phosphatidylinositol-speciwc phospholipase C9; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes (531 aa)
           
  0.716
FIM1
Fimbrin-1; Cross-links actin filaments (F-actin) in a calcium independent manner. Induces the formation of actin aggregates. Stabilizes and prevents F-actin depolymerization mediated by profilin. Key regulator of actin cytoarchitecture, probably involved in cell cycle, cell division, cell elongation and cytoplasmic tractus (687 aa)
           
  0.710
PLC8
Phosphatidylinositol-speciwc phospholipase C8; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes (531 aa)
           
  0.692
PLC4
Phosphatidylinositol-speciwc phospholipase C4; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes (597 aa)
           
  0.670
ATHATPLC1G
Phosphatidylinositol-specific phospholipase C is induced to a significant extent under various environmental stresses, such as dehydration, salinity, and low temperature. May play a role in secondary ABA response. There are two genes called ATPLC1, one corresponding to AT4g38530 and one corresponding ot AT5g58670 (this one) (561 aa)
           
  0.646
DRP4C
Dynamin related protein 4C; Putative microtubule-associated force-producing protein, able to bind and hydrolyze GTP (669 aa)
           
  0.619
KCO1
Outward rectifying potassium channel protein; Voltage-independent, large conductance and potassium- selective tonoplast ion channel. Regulated by cytoplasmic calcium and pH. Does not mediate slow-vacuolar (SV) ionic currents, but essential to establish VK currents. Has some permeability for Rb(+) and NH(4)(+), but none for Na(+), Cs(+) or Li(+). Involved in intracellular K(+) redistribution and/or K(+) retranslocation between different tissues (363 aa)
           
  0.612
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (14%) [HD]