STRINGSTRING
AT1G30930 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G30930" - F-box family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G30930F-box family protein (376 aa)    
Predicted Functional Partners:
AT5G59100
Subtilisin-like serine endopeptidase family protein (741 aa)
     
        0.438
AT5G56430
FBD-associated F-box protein (360 aa)
     
        0.438
AT5G53840
F-box/FBD/LRR-repeat protein (444 aa)
     
        0.438
AT5G52140
RING/U-box superfamily protein (280 aa)
     
        0.438
AT5G41720
Uncharacterized protein (187 aa)
     
        0.438
AT5G39560
F-box/kelch-repeat protein (403 aa)
     
        0.438
AT5G35610
Paired amphipathic helix repeat-containing protein (155 aa)
     
        0.438
AT5G22791
F-box family protein (355 aa)
     
     
0.438
AT5G06020
Self-incompatibility S1 family protein (151 aa)
     
        0.438
AT4G37950
Rhamnogalacturonate lyase family protein (678 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (22%) [HD]