STRINGSTRING
AT1G30972 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G30972" - Plant thionin family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G30972Plant thionin family protein (79 aa)    
Predicted Functional Partners:
AT5G58840
Subtilase family protein (713 aa)
     
        0.438
AT1G30974
Plant thionin family protein (79 aa)
     
     
0.438
AT5G27880
C2H2 and C2HC zinc finger-containing protein (278 aa)
     
        0.437
AT1G64107
Defensin-like protein 269 (91 aa)
     
        0.437
AT4G23520
Putative cysteine proteinase (356 aa)
     
        0.436
AT4G14276
Defensin-like protein 21 (94 aa)
     
        0.436
AT1G73610
GDSL esterase/lipase (344 aa)
     
        0.435
AT1G63522
Defensin-like protein 278 (63 aa)
     
        0.435
AT1G56415
Expressed protein (94 aa)
     
        0.435
AT1G12672
Uncharacterized protein (104 aa)
     
        0.435
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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