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AT1G31000 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G31000" - F-box and associated interaction domain-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G31000F-box and associated interaction domain-containing protein (363 aa)    
Predicted Functional Partners:
AT5G02050
Mitochondrial glycoprotein family protein (267 aa)
           
  0.868
AT3G51270
RIO kinase 2 (461 aa)
           
  0.868
AT2G01100
Uncharacterized protein (247 aa)
           
  0.868
PIRL8
Plant intracellular ras group-related LRR 8; Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction (383 aa)
           
  0.864
AT3G22230
60S ribosomal protein L27-2 (135 aa)
           
  0.806
PIMT2
Protein-l-isoaspartate methyltransferase 2; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins (309 aa)
           
  0.738
AT1G56660
Uncharacterized protein (522 aa)
           
  0.737
AT3G12960
Uncharacterized protein (86 aa)
           
  0.710
OLI2
OLIGOCELLULA 2 (682 aa)
           
  0.678
PIMT1
Protein-l-isoaspartate methyltransferase 1; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. Contributes to seed longevity and germination vigor by limiting the abnormal accumulation of the L-isoaspartyl residues in seed proteins (230 aa)
           
  0.670
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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