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OSB4 protein (Arabidopsis thaliana) - STRING interaction network
"OSB4" - Protein OSB4 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSB4Protein OSB4; Binds single-stranded DNA (360 aa)    
Predicted Functional Partners:
AT1G47730
Putative F-box protein (391 aa)
           
  0.709
AT1G02370
Pentatricopeptide repeat-containing protein (537 aa)
     
   
  0.603
AT1G62010
Mitochondrial transcription termination factor family protein (415 aa)
     
   
  0.591
AT4G02820
Pentatricopeptide repeat-containing protein (532 aa)
     
   
  0.589
AT4G40000
S-adenosyl-L-methionine-dependent methyltransferase-like protein (783 aa)
     
   
  0.587
AT1G16480
PPR repeat domain-containing protein (937 aa)
     
   
  0.578
AT3G02490
Pentatricopeptide repeat-containing protein (665 aa)
     
   
  0.557
ORF315
ATP synthase subunit C family protein (315 aa)
           
  0.555
AT3G13160
Pentatricopeptide repeat-containing protein (394 aa)
     
   
  0.545
RRP4
Ribosomal RNA processing 4; Non-catalytic component of the RNA exosome complex which has 3’->5’ exoribonuclease activity and participates in a multitude of cellular RNA processing, maturation and degradation events. In vitro, is an active and distributive 3’->5’ exonuclease requiring a free 3’-OH on the substrate and releasing nucleoside 5’-monophosphates (PubMed-11809881). Required for normal embryo development (PubMed-18160042) (322 aa)
     
   
  0.533
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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