STRINGSTRING
AT1G31530 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G31530" - DNAse I-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G31530DNAse I-like protein (283 aa)    
Predicted Functional Partners:
AT1G02080
Transcription regulators (2431 aa)
     
 
  0.972
AT5G18230
CCR4-NOT transcription complex subunit 3 (845 aa)
     
 
  0.944
CAF1b
CCR4- associated factor 1b; Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity) (278 aa)
     
 
  0.938
AT5G10960
Putative CCR4-associated factor 1-10; Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity) (277 aa)
     
 
  0.938
CAF1a
CCR4- associated factor 1a; Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity) (280 aa)
     
 
  0.938
AT3G44240
Putative CCR4-associated factor 1-8; Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity) (239 aa)
     
 
  0.938
AT2G32070
Putative CCR4-associated factor 1-7; Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity) (275 aa)
     
 
  0.938
AT1G80780
Putative CCR4-associated factor 1-6; Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity) (286 aa)
     
 
  0.938
AT1G61470
Putative CCR4-associated factor 1-5; Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity) (278 aa)
     
 
  0.938
AT1G27890
Putative CCR4-associated factor 1-4; Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity) (302 aa)
     
 
  0.938
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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