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STRINGSTRING
AT1G31920 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G31920" - Tetratricopeptide repeat in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G31920Tetratricopeptide repeat (TPR)-like superfamily protein; Contains the following InterPro domains- Pentatricopeptide repeat (InterPro-IPR002885); BEST Arabidopsis thaliana protein match is- Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR-AT5G66520.1); Has 36071 Blast hits to 13961 proteins in 258 species- Archae - 0; Bacteria - 3; Metazoa - 83; Fungi - 93; Plants - 35305; Viruses - 0; Other Eukaryotes - 587 (source- NCBI BLink); Belongs to the PPR family. PCMP-H subfamily (606 aa)    
Predicted Functional Partners:
AT2G29290
NAD(P)-binding Rossmann-fold superfamily protein; Its function is described as oxidoreductase activity, binding, catalytic activity; Involved in oxidation reduction, metabolic process; Expressed in 16 plant structures; Expressed during 11 growth stages; Contains the following InterPro domains- Short-chain dehydrogenase/reductase, conserved site (InterPro-IPR020904), NAD(P)-binding domain (InterPro-IPR016040), Glucose/ribitol dehydrogenase (InterPro-IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro-IPR002198); BEST Arabidopsis thaliana protein match is- senescence-associated [...] (262 aa)
     
   
  0.916
AT5G27290
Stress regulated protein; Unknown protein; Located in chloroplast; Expressed in 22 plant structures; Expressed during 13 growth stages; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (341 aa)
     
   
  0.871
CRD1
Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) (409 aa)
     
        0.792
AT1G07190
Lon protease; BEST Arabidopsis thaliana protein match is- lon protease 1 (TAIR-AT5G26860.1); Has 106 Blast hits to 106 proteins in 47 species- Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 11; Plants - 56; Viruses - 0; Other Eukaryotes - 5 (source- NCBI BLink) (54 aa)
     
   
  0.696
Lhca6
Photosystem I chlorophyll a/b-binding protein 6, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated. Seems involved in the function of the photosystem I in low light conditions, when other LHCA proteins are less abundant. Required, together with LHCA5, for the formation of a full-size NAD(P)H dehydrogenase- photosystem I supercomplex (NDH-PSI) that triggers cyclic and chlororespiratory electron transport in chloroplast thylakoids, especially under stress conditio [...] (270 aa)
     
   
  0.677
CAX7
Cation/calcium exchanger 1; Vacuolar membrane-localized H(+)-dependent K(+) and Na(+) transporter; Belongs to the Ca(2+)-cation antiporter (CaCA) (TC 2.A.19) family. Cation/calcium exchanger (CCX) subfamily (570 aa)
           
  0.642
AT4G24175
Uncharacterized protein At4g24170; Unknown protein; Contains the following InterPro domains- Uncharacterised protein family UPF0307 (InterPro-IPR006839); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (306 aa)
           
  0.624
FBA5
Fructose-bisphosphate aldolase 5, cytosolic; Fructose-bisphosphate aldolase that plays a key role in glycolysis and gluconeogenesis (358 aa)
     
   
  0.623
AT2G41730
Uncharacterized protein At2g41730; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G24640.1); Has 25 Blast hits to 25 proteins in 5 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (119 aa)
           
  0.619
AT5G27460
Tetratricopeptide repeat (TPR)-like superfamily protein; Contains the following InterPro domains- Pentatricopeptide repeat (InterPro-IPR002885); BEST Arabidopsis thaliana protein match is- Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR-AT1G02150.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink); Belongs to the PPR family. P subfamily (491 aa)
           
  0.583
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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