STRINGSTRING
AT1G32020 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G32020" - F-box protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G32020F-box protein (171 aa)    
Predicted Functional Partners:
AT3G27831
Putative defensin-like protein 30 (77 aa)
     
        0.438
AT5G11220
Uncharacterized protein (265 aa)
     
        0.437
AT3G56520
No apical meristem (NAM) family protein (175 aa)
     
        0.436
MEE56
Maternal effect embryo arrest 56 (195 aa)
     
        0.435
AT3G51171
Putative F-box protein (256 aa)
     
        0.435
AT5G25102
Uncharacterized protein (55 aa)
     
        0.430
AT3G60700
Uncharacterized protein (219 aa)
     
        0.427
AT1G13607
Defensin-like protein 286 (72 aa)
     
        0.415
AT5G23650
Homeodomain-like transcriptional regulator (337 aa)
     
        0.402
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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