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RCD1 protein (Arabidopsis thaliana) - STRING interaction network
"RCD1" - RADICAL-INDUCED CELL DEATH1 in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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RCD1RADICAL-INDUCED CELL DEATH1; Inactive ADP-ribosyltransferase that functions with SRO1 to regulate oxidative stress, hormonal and developmental responses. Required for embryogenesis, vegetative and reproductive development, and abiotic stress responses. May regulate several stress-responsive genes. Seems to play a larger developmental role than SRO1. Does not bind NAD in vitro (589 aa)    
Predicted Functional Partners:
SOS1
SALT OVERLY SENSITIVE 1; Acts in electroneutral exchange of protons for cations such as Na(+) or Li(+) across plasma membrane. Involved in Na(+) and K(+) homeostasis. Required for cytoplasmic Na(+) and Li(+) detoxification by secreting them from the cytoplasm to the extracellular space. Regulates Na(+) content of the xylem sap (1146 aa)
       
 
  0.918
RAP2.4
Related to AP2 4; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity) (334 aa)
       
      0.746
STO
SALT TOLERANCE; Acts as negative regulator of seedling photomorphogenesis and light-regulated inhibition of hypocotyl elongation (PubMed-17605755, PubMed-18540109, PubMed-21685177). BBX24/STO and BBX25/STH function as transcriptional corepressors of HY5 activity, leading to the down-regulation of BBX22 expression. BBX24/STO acts additively with BBX25/STH during de- etiolation and the hypocotyl shade avoidance response (PubMed-23624715). Functions as negative regulator of photomorphogenic UV-B responses by interacting with both COP1 and HY5 (PubMed-22410790). May act as a transcription [...] (248 aa)
       
 
  0.745
DREB2A
DRE-binding protein 2A; Transcriptional activator that binds specifically to the DNA sequence 5’-[AG]CCGAC-3’. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (335 aa)
       
 
  0.736
NAC046
NAC domain containing protein 46 (338 aa)
       
 
  0.735
PARP2
poly(ADP-ribose) polymerase 2; Involved in the base excision repair (BER) pathway, by catalyzing the poly(ADP-ribosyl)ation of a limited number of acceptor proteins involved in chromatin architecture and in DNA metabolism. This modification follows DNA damages and appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks (By similarity) (637 aa)
           
  0.709
NAC13
NAC domain protein 13; Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). Involved in oxidative stress tolerance by mediating regulation of mitochondrial retrograde signaling during mitochondrial dysfunction. Interacts directly with the mitochondrial dysfunction DNA consensus motif 5’-CTTGNNNNNCA[AC]G-3’, a cis-regulatory elements of several mitochondrial retrograde regulation-induced genes, and triggers increased oxidative stress tolerance (528 aa)
     
 
  0.659
EBP
Ethylene-responsive element binding protein; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity) (248 aa)
       
 
  0.647
bHLH11
Basic Helix-Loop-Helix 11 (286 aa)
       
 
  0.621
DREB2C
Dehydration-responsive element-binding protein 2C; Transcriptional activator that binds specifically to the DNA sequence 5’-[AG]CCGAC-3’. Binding to the C-repeat/DRE element mediates high salinity- and abscisic acid-inducible transcription (341 aa)
       
 
  0.599
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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