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NHL8 protein (Arabidopsis thaliana) - STRING interaction network
"NHL8" - NDR1/HIN1-like 8 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NHL8NDR1/HIN1-like 8 (688 aa)    
Predicted Functional Partners:
AT5G54370
Late embryogenesis abundant protein-like protein (337 aa)
           
  0.987
ARI12
ARIADNE 12; Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin- conjugating enzymes and then transfers it to substrates (496 aa)
           
  0.961
NHL22
NDR1/HIN1-like 22 (211 aa)
           
  0.925
NHL12
NDR1/HIN1-like 12 (210 aa)
           
  0.803
NHL1
NDR1/HIN1-like 1 (209 aa)
           
  0.737
NHL2
NDR1/HIN1-like 2 (240 aa)
           
  0.679
VAP27-1
Vesicle associated protein; Part of a membrane-cytoskeletal adapter complex that forms a bridge between the endoplasmic reticulum and the plasma membrane. Associates with microtubules (256 aa)
           
  0.670
NHL3
NDR1/HIN1-like 3; Confers resistance to Pseudomonas syringae pv. tomato DC3000 (Pst DC3000) (231 aa)
           
  0.604
AT1G18070
G1 to S phase transition protein (543 aa)
       
 
  0.507
YLS9
YELLOW-LEAF-SPECIFIC GENE 9 (227 aa)
           
  0.475
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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