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ATL1F protein (Arabidopsis thaliana) - STRING interaction network
"ATL1F" - RING/U-box superfamily protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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ATL1FRING/U-box superfamily protein; Putative RING-H2 finger protein ATL1F precursor; Belongs to the RING-type zinc finger family. ATL subfamily (332 aa)    
Predicted Functional Partners:
AT2G17190
Ubiquitin domain-containing protein DSK2a; Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for ’Lys-48’-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP) (538 aa)
       
 
  0.667
FUS9
Ubiquitin-conjugating enzyme family protein; Component of light signal transduction machinery. Involved in repression of photomorphogenesis in darkness by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes (E2s). Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis- promoting factors such as HY5, HYH and LAF1. Although strongly related to ubiquitin-conjugating enzyme, it has no catalytic activity by itself due to the absence of the conserved Cys activ [...] (182 aa)
       
 
  0.623
RIN2
E3 ubiquitin protein ligase RIN2; RPM1 interacting protein 2, has a CUE domain which is sufficient for the interaction with RPM1.Positive regulator of RPM1 and PRS2 mediated hypersensitive response.Functions as ubiquitin ligase and binds to RPM1 (578 aa)
     
   
  0.574
NIP2
NEP1-interacting protein 2; Intrinsic thylakoid membrane protein that fixes RPOTmp on the stromal side of the thylakoid membrane; Belongs to the RING-type zinc finger family. NIP subfamily (253 aa)
           
  0.566
RIN3
E3 ubiquitin protein ligase RIN3; E3 ubiquitin protein ligase that acts as positive regulator of RPM1- and RPS2-dependent hypersensitive response (HR), in association with RIN2. Probably not required for RPM1 degradation during HR (595 aa)
     
   
  0.557
UBC11
Ubiquitin-conjugating enzyme E2 11; Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Mediates the selective degradation of short-lived and abnormal proteins; Belongs to the ubiquitin-conjugating enzyme family (148 aa)
       
 
  0.527
UBC8
Ubiquitin-conjugating enzyme E2 8; Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Mediates the selective degradation of short-lived and abnormal proteins; Belongs to the ubiquitin-conjugating enzyme family (149 aa)
       
 
  0.447
DSK2
Ubiquitin domain-containing protein DSK2b; Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for ’Lys-48’-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP) (551 aa)
       
 
  0.429
UBC4
Ubiquitin-conjugating enzyme E2 4; Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins (187 aa)
     
   
  0.416
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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