• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
FdC2 protein (Arabidopsis thaliana) - STRING interaction network
"FdC2" - 2Fe-2S ferredoxin-like superfamily protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FdC22Fe-2S ferredoxin-like superfamily protein; Encodes FdC1, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI (194 aa)    
Predicted Functional Partners:
PSRP5
Plastid-specific 50S ribosomal protein 5 (PSRP5); Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; Expressed in 22 plant structures; Expressed during 13 growth stages; Has 42 Blast hits to 42 proteins in 16 species- Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (148 aa)
     
        0.949
AT5G14910
Heavy metal transport/detoxification superfamily protein ; Its function is described as metal ion binding; Involved in metal ion transport; Located in thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Heavy metal transport/detoxification protein (InterPro-IPR006121); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (178 aa)
     
        0.933
NdhO
NAD(P)H-quinone oxidoreductase subunit O, chloroplastic; NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (158 aa)
     
   
  0.908
PSRP3/1
30S ribosomal protein 3-1, chloroplastic; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family (166 aa)
   
        0.885
FNR2
Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic; Encodes a leaf-type ferredoxin-NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma (369 aa)
   
 
  0.874
AT4G02530
Thylakoid lumenal 16.5 kDa protein, chloroplastic; Chloroplast thylakoid lumen protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in 6 components; Expressed in 22 plant structures; Expressed during 13 growth stages; Has 54 Blast hits to 54 proteins in 21 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (216 aa)
     
        0.868
PRXQ
Thioredoxin superfamily protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. Involved in the photosystem II protection against hydrogen peroxide; Belongs to the peroxiredoxin family. BCP/PrxQ subfamily (217 aa)
     
        0.863
AT3G51510
Uncharacterized protein F26O13.150; Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast thylakoid membrane, chloroplast; Expressed in 22 plant structures; Expressed during 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source- NCBI BLink) (181 aa)
     
        0.860
NTRC
NADPH-dependent thioredoxin reductase 3; Thioredoxin reductase (TR) that exhibits both TR and thioredoxin (Trx) activities. Contains a C-terminal functional Trx domain. Functions as an electron donor for plastidial 2-Cys peroxiredoxins and participates in a NADPH-dependent hydrogen peroxide scavenging system in chloroplasts in the dark. Required for chlorophyll biosynthesis and biogenesis of the photosynthetic apparatus. Activates aerobic cyclase which converts Mg- protoporhyrin monomethyl ester into protochlorophyllide. Involved in a light-dependent regulation of starch biosynthesis b [...] (529 aa)
   
   
  0.853
PETE1
Plastocyanin minor isoform, chloroplastic; One of two Arabidopsis plastocyanin genes. Expressed at 1/10th level of PETE2. Does not respond to increased copper levels and is thought to be the isoform that participates in electron transport under copper-limiting conditions (171 aa)
   
   
  0.852
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (14%) [HD]