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AtLEA4-1 protein (Arabidopsis thaliana) - STRING interaction network
"AtLEA4-1" - Late Embryogenesis Abundant 4-1 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AtLEA4-1Late Embryogenesis Abundant 4-1 (134 aa)    
Predicted Functional Partners:
AT3G03150
Uncharacterized protein (121 aa)
           
  0.780
AT1G32520
Uncharacterized protein (239 aa)
           
  0.739
AT1G20880
RNA recognition motif-containing protein (274 aa)
           
  0.733
AT5G55550
RNA recognition motif-containing protein (460 aa)
           
  0.704
AT4G14342
Splicing factor 3B subunit 5 (87 aa)
           
  0.703
LEA4-5
Late Embryogenesis Abundant 4-5 (158 aa)
     
   
  0.687
FdC2
Ferredoxin (194 aa)
           
  0.675
AT2G44060
Late embryogenesis abundant protein, group 2 (325 aa)
           
  0.671
AT5G17165
Uncharacterized protein (116 aa)
           
  0.670
AT3G16990
Haem oxygenase-like, multi-helical; Involved in thiamine salvage by hydrolyzing the thiamine breakdown product 4-amino-5-aminomethyl-2-methylpyrimidine (amino- HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) (PubMed-25014715). Has a high formylamino-HMP amidohydrolase activity (PubMed-25014715). No activity with other thiamine degradation products such as thiamine mono- or diphosphate, oxothiamine, oxythiamine, thiamine disulfide, desthiothiamine or thiochrome as substrates (PubMed-25014715). Does not display thiaminase II activity, as it is unable to hydrolyze thiamine (PubMe [...] (221 aa)
           
  0.670
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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