• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
NACA5 protein (Arabidopsis thaliana) - STRING interaction network
"NACA5" - Nascent polypeptide-associated complex subunit alpha-like protein 5 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NACA5Nascent polypeptide-associated complex subunit alpha-like protein 5; May promote appropriate targeting of ribosome-nascent polypeptide complexes (209 aa)    
Predicted Functional Partners:
AT1G73230
Nascent polypeptide-associated complex NAC; Its function is described as molecular_function unknown; Involved in response to salt stress; Located in cellular_component unknown; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Nascent polypeptide-associated complex NAC (InterPro-IPR002715); BEST Arabidopsis thaliana protein match is- basic transcription factor 3 (TAIR-AT1G17880.1); Has 832 Blast hits to 832 proteins in 250 species- Archae - 0; Bacteria - 0; Metazoa - 423; Fungi - 174; Plants - 145; Viruses - 0; Other Eukaryote [...] (165 aa)
     
 
  0.992
BTF3
Basic transcription factor 3 (BTF3); Its function is described as sequence-specific DNA binding transcription factor activity; Involved in response to salt stress; Located in cellular_component unknown; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Nascent polypeptide-associated complex NAC (InterPro-IPR002715); BEST Arabidopsis thaliana protein match is- Nascent polypeptide-associated complex NAC (TAIR-AT1G73230.1); Has 841 Blast hits to 841 proteins in 250 species- Archae - 0; Bacteria - 0; Metazoa - 427; Fungi - 178; Pl [...] (165 aa)
     
 
  0.992
RPL24A
RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020) (164 aa)
     
 
  0.934
AT1G27400
Ribosomal protein L22p/L17e family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L22/L17 (InterPro-IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro-IPR005721), Ribosomal protein L22/L17, conserved site (InterPro-IPR018260); BEST Arabidopsis thaliana protein match is- Ribosomal protein L22p/L17e [...] (176 aa)
     
 
  0.927
AT5G02870
Ribosomal protein L4/L1 family; Its function is described as structural constituent of ribosome; Involved in translation; Located in 8 components; Expressed in 26 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Ribosomal protein L4/L1e (InterPro-IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro-IPR013000); BEST Arabidopsis thaliana protein match is- Ribosomal protein L4/L1 family (TAIR-AT3G09630.1); Has 1138 Blast hits to 1137 proteins in 402 species- Archae - 316; Bacteria - 12; Metazoa - 270; Fungi - 177; [...] (407 aa)
     
      0.926
AT3G09630
Ribosomal protein L4/L1 family; Its function is described as structural constituent of ribosome; Involved in translation; Located in 9 components; Expressed in 26 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Ribosomal protein L4/L1e (InterPro-IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro-IPR013000); BEST Arabidopsis thaliana protein match is- Ribosomal protein L4/L1 family (TAIR-AT5G02870.1); Has 1142 Blast hits to 1141 proteins in 405 species- Archae - 316; Bacteria - 17; Metazoa - 269; Fungi - 177; [...] (406 aa)
     
      0.916
AT1G67430
Ribosomal protein L22p/L17e family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in 6 components; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L22/L17 (InterPro-IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro-IPR005721), Ribosomal protein L22/L17, conserved site (InterPro-IPR018260); BEST Arabidopsis thaliana protein match is- Ribosomal protein L22p/L17e family protein (TAIR-AT1G27400.1); Has 2094 Blast hits to 2094 protein [...] (175 aa)
     
 
  0.916
STV1
RPL24B encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B. Mutants showed defects in apical-basal gynoecium patterning similar to previously described ett and mp mutants. Transformation of stv1-1 mutant with a uORF-eliminated ETT construct partially suppressed the stv1 gynoecium phenotype, implying that STV1 could influence ETT translation through its uORFs. Regulated by TCP20 (163 aa)
     
 
  0.914
AT4G18100
Ribosomal protein L32e; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus; Expressed in callus, pollen tube, leaf; Contains the following InterPro domains- Ribosomal protein L32e (InterPro-IPR001515), Ribosomal protein L32e, conserved site (InterPro-IPR018263); BEST Arabidopsis thaliana protein match is- Ribosomal protein L32e (TAIR-AT5G46430.2); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fu [...] (133 aa)
     
      0.913
AT1G57720
Translation elongation factor EF1B, gamma chain; Probably plays a role in anchoring the complex to other cellular components (413 aa)
     
      0.909
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (9%) [HD]