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AT1G33680 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G33680" - KH domain-containing protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
AT1G33680KH domain-containing protein (763 aa)    
Predicted Functional Partners:
AT2G25970
KH domain-containing protein (632 aa)
     
 
 
0.943
AT4G10070
KH domain-containing protein (725 aa)
     
 
 
0.926
EMB2763
EMBRYO DEFECTIVE 2763; Catalytic component of the RNA exosome complex which has 3’->5’ exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. Required for 5.8S rRNA intermediate processing and the degradation of 5’ external transcribed spacer (5’ ETS), a maturation by-product of rRNA synthesis. Is not involved in the degradation of turnip crinkle virus (TCV) RNA and significant virus resistance (PubMed-24244451). Required for normal development of female gametophytes and early embryogenesis (PubMed-20798041, PubMed-24244451) (1012 aa)
     
 
    0.919
AHG2
ABA-HYPERSENSITIVE GERMINATION 2; 3’-exoribonuclease that has a preference for poly(A) tails of mRNAs, thereby efficiently degrading poly(A) tails. Exonucleolytic degradation of the poly(A) tail is often the first step in the decay of eukaryotic mRNAs. Essential for early development, possibly by participating in silencing certain maternal mRNAs translationally. May have a pivotal role in stress response (689 aa)
     
  0.918
AT3G25430
Poly(A)-specific ribonuclease PARN-like protein; 3’-exoribonuclease that has a preference for poly(A) tails of mRNAs, thereby efficiently degrading poly(A) tails. Exonucleolytic degradation of the poly(A) tail is often the first step in the decay of eukaryotic mRNAs (By similarity) (618 aa)
     
  0.917
RRP45a
Ribonuclease PH45A; Probable 3’->5’ exoribonuclease involved in the regulation of cuticular wax biosynthesis. Can perform exosomal functions and partially complement the yeast rrp45 null mutant (307 aa)
     
 
    0.910
RRP4
Ribosomal RNA processing 4; Non-catalytic component of the RNA exosome complex which has 3’->5’ exoribonuclease activity and participates in a multitude of cellular RNA processing, maturation and degradation events. In vitro, is an active and distributive 3’->5’ exonuclease requiring a free 3’-OH on the substrate and releasing nucleoside 5’-monophosphates (PubMed-11809881). Required for normal embryo development (PubMed-18160042) (322 aa)
     
  0.909
AT3G07750
3’-5’-exoribonuclease family protein (286 aa)
     
 
    0.906
CER7
ECERIFERUM 7; Probable 3’->5’ exoribonuclease involved in the regulation of cuticular wax biosynthesis by controlling the expression of CER3. May act by degrading a specific mRNA species encoding a negative regulator of CER3 transcription. Can perform exosomal functions and complement the yeast rrp45 null mutant (438 aa)
     
 
    0.906
AT4G32175
PNAS-3 related (241 aa)
       
    0.905
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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