STRINGSTRING
AT1G33930 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G33930" - Putative avirulence-responsive protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G33930Putative avirulence-responsive protein (336 aa)    
Predicted Functional Partners:
AT3G17640
Leucine-rich repeat-containing protein (396 aa)
           
  0.738
AT5G44550
Uncharacterized protein (197 aa)
           
  0.731
AT5G10890
Myosin heavy chain-related (295 aa)
           
  0.731
AT5G41140
Myosin heavy chain-related protein (983 aa)
           
  0.710
ORP4C
OSBP(oxysterol binding protein)-related protein 4C; May be involved in the transport of sterols (379 aa)
           
  0.709
AT1G52910
Uncharacterized protein (175 aa)
           
  0.677
AT5G62210
Embryo-specific protein 3, (ATS3) (223 aa)
           
  0.670
BUB3.1
Cell cycle arrest protein BUB3; Has a dual function in spindle-assembly checkpoint signaling and in promoting the establishment of correct kinetochore-microtubule (K-MT) attachments. Promotes the formation of stable end-on bipolar attachments. Necessary for kinetochore localization of BUB1. The BUB1/BUB3 complex plays a role in the inhibition of anaphase-promoting complex or cyclosome (APC/C) when spindle-assembly checkpoint is activated and inhibits the ubiquitin ligase activity of APC/C by phosphorylating its activator CDC20 (By similarity). Essential for gametophyte development (340 aa)
           
  0.600
RPA1A
Replication factor A1; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Plays an essential role at later stages of meiotic recombination events required for the formation of class I crossovers. Is essential for normal progression through meiosis in pollen mother cells. Is involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses, but does not seem to be required for the repair of meiotic DSBs (640 aa)
           
  0.558
ESP3
ENHANCED SILENCING PHENOTYPE 3; Involved in pre-mRNA splicing (1044 aa)
           
  0.558
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (13%) [HD]