STRINGSTRING
AT1G34795.1 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G34795.1" - Plant thionin family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G34795.1Plant thionin family protein (92 aa)    
Predicted Functional Partners:
AT5G57730
Uncharacterized protein (42 aa)
     
        0.438
AT5G51195
Uncharacterized protein (267 aa)
     
        0.438
AT5G50910
Uncharacterized protein (116 aa)
     
        0.438
AT5G44470
Uncharacterized protein (108 aa)
     
        0.438
AT5G39430
Uncharacterized protein (511 aa)
     
        0.438
AT5G38370
Uncharacterized protein (100 aa)
     
        0.438
AT5G37910
Protein with RING/U-box and TRAF-like domains; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. It probably triggers the ubiquitin-mediated degradation of different substrates (By similarity) (276 aa)
     
        0.438
AT5G37900
TRAF-like superfamily protein (241 aa)
     
        0.438
AT5G35540
Uncharacterized protein (189 aa)
     
        0.438
AT5G35475
General transcription factor 2-related zinc finger protein (161 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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