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AT1G35180 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G35180" - TRAM, LAG1 and CLN8 in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G35180TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (231 aa)    
Predicted Functional Partners:
CFIM-25
Homolog of CFIM-25; Component of the cleavage factor Im (CFIm) complex that plays a key role in pre-mRNA 3’-processing. Involved in association with CPSF6 or CPSF7 in pre-MRNA 3’-end poly(A) site cleavage and poly(A) addition. NUDT21/CPSF5 binds to cleavage and polyadenylation RNA substrates. The homodimer mediates simultaneous sequence-specific recognition of two 5’-UGUA-3’ elements within the pre-mRNA. Binds to, but does not hydrolyze mono- and di-adenosine nucleotides. May have a role in mRNA export (222 aa)
       
      0.493
AT4G25550
Cleavage/polyadenylation specificity factor; Component of the cleavage factor Im (CFIm) complex that plays a key role in pre-mRNA 3’-processing. Involved in association with CPSF6 or CPSF7 in pre-MRNA 3’-end poly(A) site cleavage and poly(A) addition. NUDT21/CPSF5 binds to cleavage and polyadenylation RNA substrates. The homodimer mediates simultaneous sequence-specific recognition of two 5’-UGUA-3’ elements within the pre-mRNA. Binds to, but does not hydrolyze mono- and di-adenosine nucleotides. May have a role in mRNA export (200 aa)
       
      0.493
ERF110
Ethylene response factor 110; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity) (220 aa)
     
        0.438
4CL8
4-coumarate--CoA ligase-like 8 (550 aa)
     
        0.438
AT5G24580
Heavy metal transport/detoxification superfamily protein (319 aa)
     
        0.438
SOS3
SALT OVERLY SENSITIVE 3; Acts as a calcium sensor involved in the regulatory pathway for the control of intracellular Na(+) and K(+) homeostasis and salt tolerance. Binding of a CBL protein to the regulatory NAF domain of a CIPK serine-threonine protein kinase lead to the activation of the kinase in a calcium-dependent manner. Operates in synergy with CIPK24/SOS2 to activate the plasma membrane Na(+)/H(+) antiporter SOS1. Involved in salt stress responses by mediating calcium-dependent microfilament reorganization. The CBL4/CIPK6 complex mediates translocation of AKT2 from the endoplas [...] (222 aa)
     
        0.438
AT5G19730
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (383 aa)
     
        0.438
CPuORF26
Uncharacerized protein (24 aa)
     
        0.438
TPPF
Trehalose-6-phosphate phosphatase F; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance (By similarity) (368 aa)
     
        0.438
AT4G03175
Protein kinase family protein (139 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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