STRINGSTRING
AT1G35220 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G35220" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G35220Uncharacterized protein (1005 aa)    
Predicted Functional Partners:
AT3G22980
Elongation factor EF-2 (1015 aa)
     
   
  0.932
AT5G52480
RNI-like superfamily protein (241 aa)
           
  0.879
AT5G35510
Uncharacterized protein (68 aa)
           
  0.879
AT5G16880
Target of Myb protein 1 (407 aa)
           
  0.879
AT2G39540
Gibberellin-regulated protein; Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation (87 aa)
           
  0.879
AT2G15930
Uncharacterized protein (58 aa)
           
  0.879
AT3G06480
DEAD box RNA helicase family protein; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing (1088 aa)
     
   
  0.872
AT1G03660
Ankyrin-repeat containing protein (107 aa)
           
  0.869
ATSIK
Protein kinase domain-containing protein (557 aa)
           
  0.867
TBL21
TRICHOME BIREFRINGENCE-LIKE 21; May be involved in the specific O-acetylation of cell wall polymers (526 aa)
     
   
  0.746
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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