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CYCT1;1 protein (Arabidopsis thaliana) - STRING interaction network
"CYCT1;1" - Putative cyclin-T1-1 in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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CYCT1;1Putative cyclin-T1-1; Cyclin T1;1 (CYCT1;1); Contains the following InterPro domains- Cyclin-like (InterPro-IPR011028), Transcription regulator cyclin (InterPro-IPR015429), Cyclin-related (InterPro-IPR013763), Cyclin, N-terminal (InterPro-IPR006671), Cyclin (InterPro-IPR006670); BEST Arabidopsis thaliana protein match is- Cyclin family protein (TAIR-AT5G45190.1); Has 1935 Blast hits to 1935 proteins in 244 species- Archae - 0; Bacteria - 0; Metazoa - 1012; Fungi - 386; Plants - 395; Viruses - 0; Other Eukaryotes - 142 (source- NCBI BLink) (247 aa)    
Predicted Functional Partners:
CDKD1;1
Cyclin-dependent kinase D1;1; Cyclin dependent kinase activator CDKD;1. Nuclear localization. Involved in cell cycle regulation and cell differentiation (398 aa)
     
  0.975
CAK4
Cyclin-dependent kinase D-2; Forms a stable complex with cyclin CYCH1-1 that phosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily (348 aa)
     
  0.975
CDKD1;3
Cyclin-dependent kinase D1;3; May form a stable complex with cyclin CYCH1-1 that phosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily (391 aa)
     
  0.975
AT1G18340
RNA polymerase II transcription factor B subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core, which is essential for both basal and activated transcription, and is involved in nucleotide excision repair (NER) of damaged DNA (301 aa)
     
  0.968
AT4G30820
Uncharacterized protein At4g30820; Cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related; Its function is described as molecular_function unknown; Involved in cell cycle; Located in nucleus; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Cdk-activating kinase assembly factor (MAT1) (InterPro-IPR004575), Cdk-activating kinase assembly factor, MAT1 (InterPro-IPR015877); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 173 [...] (178 aa)
     
  0.966
AT4G17020
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core, which is essential for both basal and activated transcription, and is involved in nucleotide excision repair (NER) of damaged DNA; Belongs to the TFB2 family (482 aa)
       
  0.965
CDKC2
Cyclin dependent kinase group C2; Encodes CDKC;2, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. Co-localizes with spliceosomal components in a manner dependent on the transcriptional status of the cells and on CDKC2-kinase activity. Expression of CDKC2 modifies the location of spliceosomal components; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily (513 aa)
     
  0.962
CDKC;1
Cyclin-dependent kinase C-1; Encodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development (505 aa)
     
  0.962
GTF2H2
General transcription factor IIH subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core, which is essential for transcription, and is involved in nucleotide excision repair (NER) of damaged DNA. Can restore UV resistance in the NER-deficient ssl1-1 yeast mutant (421 aa)
     
  0.960
XPB1
Homolog of xeroderma pigmentosum complementation group B 1; Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive [...] (767 aa)
       
  0.956
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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