• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
AT1G35490 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G35490" - Uncharacterized protein At1g35490 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G35490Uncharacterized protein At1g35490; bZIP family transcription factor; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Expressed in 9 plant structures; Expressed during L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Contains the following InterPro domains- Basic-leucine zipper (bZIP) transcription factor (InterPro-IPR004827); BEST Arabidopsis thaliana protein match is- Basic-leucine zipper (bZIP) transcr [...] (300 aa)    
Predicted Functional Partners:
AT5G62080
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Its function is described as lipid binding; Involved in lipid transport; Located in endomembrane system; Expressed in 8 plant structures; Expressed during petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Contains the following InterPro domains- Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro-IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro-IPR003612); BEST Arabidopsis thaliana protei [...] (95 aa)
     
   
  0.866
AT4G15740
Calcium-dependent lipid-binding (CaLB domain) family protein; Contains the following InterPro domains- C2 membrane targeting protein (InterPro-IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro-IPR008973), C2 calcium-dependent membrane targeting (InterPro-IPR000008); BEST Arabidopsis thaliana protein match is- Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR-AT3G16510.1); Has 658 Blast hits to 447 proteins in 69 species- Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 33; Plants - 570; Viruses - 0; Other Eukaryotes - 16 (source- NCBI BLink) (468 aa)
           
  0.840
CYP703A2
Cytochrome P450, family 703, subfamily A, polypeptide 2; Involved in pollen wall development. Catalyzes the conversion of medium-chain saturated fatty acids to the corresponding monohydroxylated fatty acids, with a preferential hydroxylation of lauric acid at the C-7 position. In-chain hydroxylated fatty acids, together with omega-hydroxylated fatty acids, are key monomeric aliphatic building blocks for sporopollenin synthesis during exine formation; Belongs to the cytochrome P450 family (510 aa)
     
   
  0.816
AT1G62600
Flavin-containing monooxygenase FMO GS-OX-like 4; Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates (452 aa)
           
  0.809
AT5G07230
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Its function is described as lipid binding; Involved in lipid transport; Located in endomembrane system; Expressed in leaf whorl, sepal, flower, seed; Expressed during petal differentiation and expansion stage, E expanded cotyledon stage; Contains the following InterPro domains- Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro-IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro-IPR003612); BEST Arabidopsis thaliana protein matc [...] (91 aa)
     
   
  0.720
AT3G53430
Ribosomal protein L11 family protein; Binds directly to 26S ribosomal RNA (166 aa)
           
  0.710
AT2G26490
Transducin/WD40 repeat-like superfamily protein; Negative regulator of pollen germination. Prevents pollination in moist environments by inhibiting jasmonic acid synthesis. Stabilizes pollen tube growth (465 aa)
     
   
  0.684
AT4G12760
Unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (258 aa)
           
  0.667
TPS4
Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4; Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active but no trehalose phosphatase (TPP)-like domain (795 aa)
           
  0.630
NTMC2T4
Calcium-dependent lipid-binding (CaLB domain) family protein; NTMC2T4; Its function is described as lipid binding; Involved in biological_process unknown; Located in plasma membrane; Expressed in male gametophyte, cultured cell, callus, pollen tube; Expressed during M germinated pollen stage; Contains the following InterPro domains- C2 membrane targeting protein (InterPro-IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro-IPR008973), C2 region (InterPro-IPR020477), C2 calcium-dependent membrane targeting (InterPro-IPR000008); BEST Arabidopsis thaliana protein match is- Calcium [...] (510 aa)
           
  0.597
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (10%) [HD]