STRINGSTRING
AT1G35900 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G35900" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G35900Uncharacterized protein (99 aa)    
Predicted Functional Partners:
AT4G12735
Uncharacterized protein (60 aa)
           
  0.987
BGLU8
Beta glucosidase 8 (497 aa)
           
  0.987
AT2G31425
Enzyme inhibitor/ pectinesterase (185 aa)
           
  0.987
AT3G11880
Uncharacterized protein (443 aa)
           
  0.985
AT3G50170
Uncharacterized protein (541 aa)
           
  0.951
AT3G61960
Protein kinase family protein; Serine/threonine protein kinase involved in autophagy in a nutritional condition-dependent manner. The ATG1-ATG13 protein kinase complex regulates downstream events required for autophagosome enclosure and/or vacuolar delivery. Becomes a target of autophagy under nutrient starvation. Connects autophagy to plant nutritional status (626 aa)
           
  0.893
AT2G42490
Primary-amine oxidase (776 aa)
           
  0.869
AT5G03100
F-box protein (307 aa)
           
  0.862
AT3G20530
Protein kinase family protein (386 aa)
           
  0.862
scpl20
Carboxypeptidase C; Probable carboxypeptidase (497 aa)
           
  0.861
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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