STRINGSTRING
AT1G37000 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G37000" - Beta-galactosidase related protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G37000Beta-galactosidase related protein (219 aa)    
Predicted Functional Partners:
AT5G29807
Uncharacterized protein (84 aa)
     
        0.438
AT4G06688
Uncharacterized protein (610 aa)
     
        0.437
AT5G32590
Myosin heavy chain-related (761 aa)
     
        0.436
AT4G07932
Uncharacterized protein (195 aa)
     
        0.436
AT2G15110
Uncharacterized protein (583 aa)
     
        0.436
AT4G03830
Uncharacterized protein (578 aa)
     
        0.435
AT3G43148
Uncharacterized protein (673 aa)
     
        0.435
AT5G36900
Uncharacterized protein (120 aa)
     
        0.428
AT1G20400
Uncharacterized protein (944 aa)
     
        0.427
AT4G08691
Uncharacterized protein (167 aa)
     
        0.423
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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