STRINGSTRING
AT1G41820 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G41820" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G41820Uncharacterized protein (401 aa)    
Predicted Functional Partners:
AT5G34581
Hydroxyproline-rich glycoprotein family protein (161 aa)
     
        0.438
AT5G32613
Zinc knuckle (CCHC-type) family protein (457 aa)
     
        0.438
AT5G28052
Uncharacterized protein (31 aa)
     
        0.438
AT4G06688
Uncharacterized protein (610 aa)
     
        0.438
AT4G06639
Uncharacterized protein (123 aa)
     
        0.438
EDA34
Embryo sac development arrest 34 (257 aa)
     
        0.438
AT4G00005
Prenylated rab acceptor family protein (118 aa)
     
        0.438
MEE38
Maternal effect embryo arrest 38 (295 aa)
     
        0.438
AT3G43148
Uncharacterized protein (673 aa)
     
        0.438
AT3G32200
Uncharacterized protein (148 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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