STRINGSTRING
AT1G42430 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G42430" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G42430Uncharacterized protein (426 aa)    
Predicted Functional Partners:
AT1G80130
Tetratricopeptide repeat domain-containing protein (305 aa)
           
  0.841
PP2-A15
Phloem protein 2-A15 (300 aa)
           
  0.739
AT1G71740
Uncharacterized protein (130 aa)
           
  0.679
PP2-B8
Phloem protein 2-B8 (305 aa)
           
  0.678
AT4G35160
O-methyltransferase family protein (382 aa)
           
  0.675
AT5G37860
Heavy metal transport/detoxification superfamily protein (262 aa)
           
  0.670
AT4G33040
glutaredoxin-C6; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity) (144 aa)
           
  0.670
RLP33
Receptor like protein 33 (875 aa)
           
  0.670
NIC1
Nicotinamidase 1; Catalyzes the deamidation of nicotinamide, an early step in the NAD(+) salvage pathway. Prevents the accumulation of intracellular nicotinamide, a known inhibitor of poly(ADP-ribose) polymerases (PARP enzymes) (244 aa)
           
  0.634
BGLU11
Beta glucosidase 11 (521 aa)
           
  0.603
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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