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AT1G42980 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G42980" - Actin-binding FH2 (formin homology 2) family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G42980Actin-binding FH2 (formin homology 2) family protein; Its function is described as actin binding; Located in endomembrane system; Contains the following InterPro domains- Actin-binding FH2 (InterPro-IPR015425); BEST Arabidopsis thaliana protein match is- Formin Homology 14 (TAIR-AT1G31810.1); Has 905 Blast hits to 899 proteins in 94 species- Archae - 0; Bacteria - 0; Metazoa - 566; Fungi - 10; Plants - 221; Viruses - 0; Other Eukaryotes - 108 (source- NCBI BLink); Belongs to the formin-like family. Class-II subfamily (299 aa)    
Predicted Functional Partners:
AT1G25570
Di-glucose binding protein with Leucine-rich repeat domain; Located in plasma membrane, vacuole; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Malectin/receptor-like protein kinase (InterPro-IPR021720), Leucine-rich repeat (InterPro-IPR001611); BEST Arabidopsis thaliana protein match is- receptor like protein 4 (TAIR-AT1G28340.1); Has 39900 Blast hits to 11672 proteins in 418 species- Archae - 2; Bacteria - 388; Metazoa - 87; Fungi - 9; Plants - 38059; Viruses - 0; Other Eukaryotes - 1355 (source- NCBI BLink) (628 aa)
       
 
  0.967
AT2G04870
Uncharacterized protein At2g04870; Unknown protein; Has 14 Blast hits to 14 proteins in 7 species- Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 5 (source- NCBI BLink) (72 aa)
           
  0.967
AT1G26330
DNA binding; Its function is described as DNA binding; Involved in biological_process unknown; Located in nucleus; Expressed in 8 plant structures; Expressed during 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Contains the following InterPro domains- WD40 repeat-like-containing domain (InterPro-IPR011046), FY-rich, C-terminal (InterPro-IPR003889), WD40/YVTN repeat-like-containing domain (InterPro-IPR015943) (1194 aa)
           
  0.967
AT3G05470
Actin-binding FH2 (formin homology 2) family protein; Might be involved in the organization and polarity of the actin cytoskeleton (884 aa)
           
  0.953
AT5G25500
Exosome complex exonuclease; Unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (420 aa)
           
  0.930
AT4G10790
UBX domain-containing protein; Contains the following InterPro domains- UAS (InterPro-IPR006577), UBX (InterPro-IPR001012); BEST Arabidopsis thaliana protein match is- Ubiquitin-like superfamily protein (TAIR-AT4G23040.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (480 aa)
     
   
  0.903
AFH1
Formin-like protein 1; Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event; Belongs to the formin-like family. Class-I subfamily (1051 aa)
           
  0.867
At2g06200
Growth-regulating factor 6; Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower (244 aa)
           
  0.838
AT2G43800
Actin-binding FH2 (formin homology 2) family protein; Might be involved in the organization and polarity of the actin cytoskeleton (894 aa)
           
  0.804
AT3G16060
ATP binding microtubule motor family protein; Acts redundantly with KIN13A to modulate cell wall synthesis and cell expansion via the THE1 pathway (684 aa)
     
 
  0.566
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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