STRINGSTRING
EMB2207 protein (Arabidopsis thaliana) - STRING interaction network
"EMB2207" - Ribosomal protein 1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMB2207Ribosomal protein 1 (389 aa)    
Predicted Functional Partners:
EMB2296
Embryo defective 2296 (258 aa)
 
  0.999
AT5G02870
60S ribosomal protein L4-2 (407 aa)
 
  0.999
XW6
40S ribosomal protein S2-1 (284 aa)
   
  0.999
AT3G09630
60S ribosomal protein L4-1 (406 aa)
 
  0.999
AT2G37190
60S ribosomal protein L12-1; Binds directly to 26S ribosomal RNA (166 aa)
   
  0.999
AT2G41840
40S ribosomal protein S2-3 (285 aa)
   
  0.999
SAC52
SUPPRESSOR OF ACAULIS 52; Ribosomal protein involved in translational regulation (PubMed-18694459). Contribute to general translation under UV-B stress (PubMed-20516338, PubMed-23886624). Involved in the NIK1- mediated defense response to geminivirus infection (PubMed-18789471, PubMed-19112492). Acts coordinately with LIMYB as a transcriptional repressor (PubMed-25707794) (220 aa)
   
  0.999
AT2G01250
60S ribosomal protein L7-2 (242 aa)
   
  0.999
AT5G35530
40S ribosomal protein S3-3 (248 aa)
   
  0.999
RPL5A
Ribosomal protein L5; Binds to 5S ribosomal RNA (301 aa)
   
  0.999
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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