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STRINGSTRING
AT1G43415 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G43415" - Unknown protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G43415Unknown protein; Has 1 Blast hits to 1 proteins in 1 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (117 aa)    
Predicted Functional Partners:
AT5G36320
Encodes a ECA1 gametogenesis related family protein (118 aa)
     
        0.597
AT1G34815.1
Encodes a Plant thionin family protein (92 aa)
     
        0.469
AT1G34810.1
Encodes a Plant thionin family protein (92 aa)
     
        0.469
AT5G36440.1
Encodes a ECA1 gametogenesis related family protein (118 aa)
     
        0.467
AT5G36430.1
Encodes a ECA1 gametogenesis related family protein (118 aa)
     
        0.467
AT5G36350
Encodes a ECA1 gametogenesis related family protein (118 aa)
     
        0.467
AT5G36410.1
Encodes a ECA1 gametogenesis related family protein (118 aa)
     
        0.467
AT5G36400.1
Encodes a ECA1 gametogenesis related family protein (118 aa)
     
        0.467
AT5G36390.1
Encodes a ECA1 gametogenesis related family protein (118 aa)
     
        0.467
AT5G36380.1
Encodes a ECA1 gametogenesis related family protein (118 aa)
     
        0.467
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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