STRINGSTRING
AT1G44085 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G44085" - Glycine-rich protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G44085Glycine-rich protein (90 aa)    
Predicted Functional Partners:
AT1G51090
Heavy-metal-associated domain-containing protein (171 aa)
           
  0.474
AT4G24380
Uncharacterized protein (234 aa)
           
  0.473
AT5G11700
Uncharacterized protein (1476 aa)
           
  0.443
AT5G07810
SNF2 and helicase domain-containing protein (1190 aa)
           
  0.443
AT3G51350
Aspartyl protease family protein (528 aa)
           
  0.443
AT5G50801
Uncharacterized protein (51 aa)
     
        0.438
AT4G08267
hAT transposon superfamily protein (126 aa)
     
        0.438
AT3G50123
Uncharacterized protein (47 aa)
     
        0.438
AT3G25099
Uncharacterized protein (35 aa)
     
        0.438
AT3G21371
Uncharacterized protein (68 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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