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STRINGSTRING
AT1G44085 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G44085" - Glycine-rich protein, putative in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G44085Glycine-rich protein, putative; Glycine-rich protein; BEST Arabidopsis thaliana protein match is- glycine-rich protein (TAIR-AT3G29033.1); Has 124 Blast hits to 113 proteins in 33 species- Archae - 0; Bacteria - 18; Metazoa - 31; Fungi - 4; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source- NCBI BLink) (90 aa)    
Predicted Functional Partners:
AT5G56070
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G56050.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (119 aa)
     
        0.842
AT4G17590
NOL1/NOP2/sun family protein; Contains the following InterPro domains- Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro-IPR001678); BEST Arabidopsis thaliana protein match is- S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR-AT4G26600.1); Has 459 Blast hits to 368 proteins in 186 species- Archae - 2; Bacteria - 0; Metazoa - 137; Fungi - 144; Plants - 100; Viruses - 0; Other Eukaryotes - 76 (source- NCBI BLink) (201 aa)
     
        0.842
AT3G29033
Glycine-rich protein; BEST Arabidopsis thaliana protein match is- glycine-rich protein (TAIR-AT1G44085.1); Has 270 Blast hits to 229 proteins in 72 species- Archae - 0; Bacteria - 27; Metazoa - 122; Fungi - 51; Plants - 50; Viruses - 2; Other Eukaryotes - 18 (source- NCBI BLink) (167 aa)
     
     
0.842
AT2G16620
Protein kinase superfamily protein; Its function is described as protein kinase activity, ATP binding; Involved in protein amino acid phosphorylation; Located in cellular_component unknown; Contains the following InterPro domains- Serine-threonine/tyrosine-protein kinase (InterPro-IPR001245), Protein kinase-like domain (InterPro-IPR011009); BEST Arabidopsis thaliana protein match is- protein kinase-related (TAIR-AT3G23650.1); Has 12444 Blast hits to 12366 proteins in 175 species- Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 12429; Viruses - 0; Other Eukaryotes - 5 (sourc [...] (133 aa)
     
        0.707
AT3G44935
BEST Arabidopsis thaliana protein match is- Pentatricopeptide repeat (PPR) superfamily protein (TAIR-AT5G28420.1); Has 3 Blast hits to 3 proteins in 2 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (110 aa)
     
        0.607
AT1G47680
Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G47700.1); Has 3 Blast hits to 3 proteins in 1 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (104 aa)
     
        0.596
AT1G43320
Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Has 6 Blast hits to 4 proteins in 2 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (118 aa)
     
        0.491
AT5G39920
Contains the following InterPro domains- Pre-mRNA cleavage complex II Clp1 (InterPro-IPR010655); BEST Arabidopsis thaliana protein match is- CLP1-similar protein 5 (TAIR-AT5G39930.1); Has 25 Blast hits to 25 proteins in 11 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (107 aa)
     
        0.471
AT3G23650
Protein kinase-related; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; BEST Arabidopsis thaliana protein match is- Protein kinase superfamily protein (TAIR-AT2G16620.1); Has 413 Blast hits to 413 proteins in 21 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 413; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (134 aa)
     
        0.465
AT5G27606
Unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (270 aa)
     
        0.463
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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