STRINGSTRING
SIAR1 protein (Arabidopsis thaliana) - STRING interaction network
"SIAR1" - Siliques Are Red 1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIAR1Siliques Are Red 1 (370 aa)    
Predicted Functional Partners:
LUL1
LOG2-LIKE UBIQUITIN LIGASE1; Acts as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin- conjugating enzymes and then transfers it to substrates (in vitro) (337 aa)
           
  0.670
AT2G16660
Putative nodulin protein (546 aa)
           
  0.636
GDU1
Glutamine dumper 1; Probable subunit of an amino acid transporter involved in the regulation of the amino acid metabolism. Stimulates amino acid export by activating nonselective amino acid facilitators. Required the interaction with the RING-type E3 ubiquitin-protein ligase LOG2 to fulfill its function. Plays a role in the Gln export at hydathodes, at xylem parenchyma into xylem sap and from mesophyll into leaf apoplasm. Acts upstream genes involved in the salicylic acid (SA) pathway and in the geminivirus-host interaction (158 aa)
     
   
  0.616
GDU3
Glutamine dumper 3; Probable subunit of an amino acid transporter involved in the regulation of the amino acid metabolism. Stimulates amino acid export by activating nonselective amino acid facilitators. Acts upstream genes involved in the salicylic acid (SA) pathway and in the geminivirus-host interaction (148 aa)
           
  0.604
AAP1
Amino acid permease 1; Amino acid-proton symporter. Stereospecific transporter with a broad specificity for histidine, glutamate and neutral amino acids. Reduced affinities for asparagine and valine. Involved in amino acid uptake from the apoplastic cavity into the embryo cells for storage protein accumulation and in root amino acid uptake (485 aa)
           
  0.601
AT2G46810
Transcription factor bHLH70 (371 aa)
           
  0.600
AT3G14470
Putative disease resistance RPP13-like protein 1; Potential disease resistance protein (1054 aa)
           
  0.550
MES4
Methyl esterase 4; Methylesterase shown to have carboxylesterase activity and methyl salicylate (MeJA) esterase activity in vitro (263 aa)
           
  0.550
NRT1.5
Nitrate transporter 1.5; Low-affinity proton-dependent bidirectional nitrate transporter. Involved in nitrate loading into xylem and not in nitrate uptake. Not involved in histidine or dipeptides transport (614 aa)
     
   
  0.535
AT4G27190
NB-ARC domain-containing disease resistance protein; Disease resistance protein (985 aa)
           
  0.517
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (6%) [HD]