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AT1G44920 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G44920" - Uncharacterized protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G44920Uncharacterized protein (258 aa)    
Predicted Functional Partners:
AT5G24680
Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 (399 aa)
           
  0.911
PNM1
Pentatricopeptide repeat-containing protein; RNA-binding protein that functions in both mitochondrion and nucleus. In mitochondrion, it is associated with polysomes and may play a role in translation. Required during embryogenesis. In nucleus, might be involved in the regulation of its own gene expression (521 aa)
       
 
  0.862
TCP8
TCP domain protein 8; Can specifically bind site II elements in the promoter region of PP438/PNM1 (401 aa)
           
  0.674
PPR336
Pentatricopeptide repeat 336; May be involved in translation through its association with polysomes. Could bind RNA (408 aa)
           
  0.673
AT5G27560
Uncharacterized protein (341 aa)
   
        0.636
NAP1;1
Nucleosome assembly protein1;1; May modulate chromatin structure by regulation of nucleosome assembly/disassembly (By similarity). Contributes to the regulation of cell proliferation and cell expansion. May function in nucleotide excision repair (NER). Involved in somatic homologous recombination (372 aa)
           
  0.631
AT1G67700
Uncharacterized protein; Involved in photoprotection. Forms a complex with LQY1 that is involved in the repair and reassembly cycle of the PSII- LHCII supercomplex under high-light conditions. May function in guiding the release of psbC from PSII core monomers (231 aa)
     
        0.623
RPS1
Ribosomal protein S1; Required for optimal plastid performance in terms of photosynthesis and growth. Required for the translation of plastid mRNAs (PubMed-22900828). Involved in cellular heat stress response and required for heat tolerance. Required for transcriptional activation of HSFA2 and its target genes in response to heat stress. Plays a critical role in biosynthesis of thylakoid membrane proteins encoded by chloroplast genes (PubMed-22570631) (416 aa)
     
   
  0.621
AT1G05140
Peptidase M50-like protein; Metalloprotease essential for chloroplast and plant development. May be involved in regulated intramembrane proteolysis (RIP) (441 aa)
   
        0.606
EMB3143
EMBRYO DEFECTIVE 3143 (211 aa)
   
        0.591
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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