STRINGSTRING
AT1G44990 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G44990" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G44990Uncharacterized protein (74 aa)    
Predicted Functional Partners:
AT5G54360
C2H2-like zinc finger protein (270 aa)
     
        0.438
AT5G52610
Putative F-box protein (351 aa)
     
        0.438
AT5G42640
Zinc finger (C2H2 type) family protein (300 aa)
     
        0.438
AT4G33830
Glycosyl hydrolase family 10 protein (576 aa)
     
        0.438
AT4G05250
Ubiquitin family protein (318 aa)
     
        0.438
AT3G44810
F-box protein (448 aa)
     
        0.438
AT3G44428
ECA1 gametogenesis related family protein (110 aa)
     
        0.438
AT2G25120
Bromo-adjacent homology (BAH) domain-containing protein (380 aa)
     
        0.438
UNE4
Unfertilized embryo sac 4 (294 aa)
     
        0.438
APRR6
Pseudo-response regulator 6 (755 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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