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AT1G45100 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G45100" - RNA recognition motif-containing protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Cooccurence
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[Homology]
Score
AT1G45100RNA recognition motif-containing protein (497 aa)    
Predicted Functional Partners:
AT1G18070
G1 to S phase transition protein (543 aa)
     
 
  0.956
AT1G29550
Translation initiation factor eIF-4E; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5’-terminal secondary structure and recruitment of mRNA to the ribosome. Recognizes and binds the 7-methylguanosine- containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures (By similarity) (240 aa)
     
  0.840
eIFiso4G1
MIF4G domain and MA3 domain-containing protein; Plays a role in the accumulation of some potyvirus during viral infection (780 aa)
     
  0.837
AT4G30680
Initiation factor eIF-4 gamma, MA3 (263 aa)
     
  0.837
AT1G62410
MIF4G domain-containing protein (223 aa)
     
  0.837
LSP1
Translation initiation factor 4E-2; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5’-terminal secondary structure and recruitment of mRNA to the ribosome. Recognizes and binds the 7-methylguanosine- containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures (By similarity) (198 aa)
     
  0.837
EIF4E
Translation initiation factor eIF-4E; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5’-terminal secondary structure and recruitment of mRNA to the ribosome. Recognizes and binds the 7-methylguanosine- containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures (By similarity) (235 aa)
     
  0.837
eIF4E3
Translation initiation factor eIF-4E; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5’-terminal secondary structure and recruitment of mRNA to the ribosome. Recognizes and binds the 7-methylguanosine- containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures (By similarity) (300 aa)
     
  0.837
AT4G21110
G10 family protein (145 aa)
       
      0.837
CID4
CTC-interacting domain 4 (595 aa)
     
 
  0.797
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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