STRINGSTRING
AT1G45215 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G45215" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G45215Uncharacterized protein (115 aa)    
Predicted Functional Partners:
AT5G34885
Uncharacterized protein (115 aa)
     
     
0.438
AT3G57840
Self-incompatibility S1 family protein (154 aa)
     
        0.438
AT3G44115
Uncharacterized protein (115 aa)
     
     
0.438
AT3G30387.1
Uncharacterized protein (115 aa)
     
     
0.438
AT3G30385
Uncharacterized protein (115 aa)
     
     
0.438
AT1G57777
Uncharacterized protein (115 aa)
     
     
0.438
AT5G60964
ECA1 gametogenesis related family protein (112 aa)
     
        0.437
AT3G57850
Uncharacterized protein (90 aa)
     
        0.437
AT1G56385
Plant self-incompatibility protein S1 family (152 aa)
     
        0.437
AT1G45221
Encodes a ECA1 gametogenesis related family protein (115 aa)
     
     
0.437
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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