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STRINGSTRING
AT1G45545 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G45545" - Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 2 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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AT1G45545Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 2; Plant protein of unknown function (DUF827); Contains the following InterPro domains- Protein of unknown function DUF827, plant (InterPro-IPR008545); BEST Arabidopsis thaliana protein match is- Plant protein of unknown function (DUF827) (TAIR-AT5G42880.1); Has 129275 Blast hits to 70040 proteins in 3406 species- Archae - 1956; Bacteria - 28575; Metazoa - 54363; Fungi - 10498; Plants - 7741; Viruses - 526; Other Eukaryotes - 25616 (source- NCBI BLink); Belongs to the WEB family (752 aa)    
Predicted Functional Partners:
AT5G55840
Pentatricopeptide repeat (PPR) superfamily protein; Contains the following InterPro domains- Pentatricopeptide repeat (InterPro-IPR002885); BEST Arabidopsis thaliana protein match is- Pentatricopeptide repeat (PPR) superfamily protein (TAIR-AT5G59900.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (1136 aa)
           
  0.493
F17K4.40
Ribosomal protein L33 family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, intracellular, large ribosomal subunit; Contains the following InterPro domains- Ribosomal protein L33 (InterPro-IPR001705); BEST Arabidopsis thaliana protein match is- Ribosomal protein L33 family protein (TAIR-AT3G06320.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (58 aa)
           
  0.475
AT3G06320
Ribosomal protein L33 family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, intracellular, large ribosomal subunit; Contains the following InterPro domains- Ribosomal protein L33 (InterPro-IPR001705); BEST Arabidopsis thaliana protein match is- Ribosomal protein L33 family protein (TAIR-AT5G18790.1); Has 2830 Blast hits to 2830 proteins in 1196 species- Archae - 0; Bacteria - 2547; Metazoa - 35; Fungi - 17; Plants - 59; Viruses - 0; Other Eukaryotes - 172 (source- NCBI BLink) (58 aa)
           
  0.475
AT4G34270
TIP41-like family protein; May be involved in the regulation of the TOR signaling pathway. Indirectly activates the PP2A phosphatase via interaction with its suppressor TAP46. Could play a role in cytoskeleton functions (290 aa)
           
  0.416
AT4G26410
Uncharacterised conserved protein UCP022280; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 25 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Uncharacterised conserved protein UCP022280 (InterPro-IPR016803); BEST Arabidopsis thaliana protein match is- Uncharacterised conserved protein UCP022280 (TAIR-AT2G45060.1); Has 79 Blast hits to 79 proteins in 22 species- Archae - 3; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 72; Viruses - 1; Oth [...] (263 aa)
           
  0.416
AT2G28390
Vacuolar fusion protein MON1 homolog; Plays an important role in membrane trafficking through the secretory apparatus. In complex with CCZ1, acts as a guanine exchange factor (GEF) for RABG3F of the Rab7 protein family. Promotes the exchange of GDP to GTP, converting RABG3F from an inactive GDP-bound form into an active GTP-bound form. The RABG3F active form is involved in protein trafficking from prevacuolar compartments (PVCs) to vacuoles. May serve as a linker between Rab5 and Rab7 protein families in PVCs and mediate PVC maturation (607 aa)
           
  0.416
ELI3-2
Cinnamyl alcohol dehydrogenase 8; Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5- hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols (359 aa)
           
  0.410
ELI3-1
Cinnamyl alcohol dehydrogenase 7; Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5- hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols; Belongs to the zinc-containing alcohol dehydrogenase family (357 aa)
           
  0.410
CAD6
Probable cinnamyl alcohol dehydrogenase 6; Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5- hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols; Belongs to the zinc-containing alcohol dehydrogenase family (363 aa)
           
  0.410
SAG24
Senescence associated gene 24 (SAG24); Its function is described as structural constituent of ribosome; Involved in response to UV-B, translation; Located in cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole; Expressed in 25 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Ribosomal protein L10e (InterPro-IPR001197), Ribosomal protein L10e/L16 (InterPro-IPR016180), Ribosomal protein L10e, conserved site (InterPro-IPR018255); BEST Arabidopsis thaliana protein match is- Ribosomal protein L16p/L10e family [...] (221 aa)
           
  0.402
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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