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RLP6 protein (Arabidopsis thaliana) - STRING interaction network
"RLP6" - Disease resistance protein, putative in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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RLP6Disease resistance protein, putative; Receptor like protein 6 (RLP6); Involved in signal transduction, defense response; Located in membrane; Expressed in leaf; Contains the following InterPro domains- Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro-IPR013210), Leucine-rich repeat (InterPro-IPR001611); BEST Arabidopsis thaliana protein match is- receptor like protein 7 (TAIR-AT1G47890.1); Has 122755 Blast hits to 32280 proteins in 1220 species- Archae - 51; Bacteria - 8781; Metazoa - 27217; Fungi - 1355; Plants - 75532; Viruses - 33; Other Eukaryotes - 9786 (source- [...] (994 aa)    
Predicted Functional Partners:
IQD23
At5g62070/mtg10_90; IQ-domain 23 (IQD23); Contains the following InterPro domains- IQ calmodulin-binding region (InterPro-IPR000048); BEST Arabidopsis thaliana protein match is- IQ-domain 24 (TAIR-AT5G07240.1); Has 854 Blast hits to 833 proteins in 54 species- Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 7; Plants - 775; Viruses - 0; Other Eukaryotes - 10 (source- NCBI BLink) (403 aa)
           
  0.694
FRS5
Protein FAR1-RELATED SEQUENCE 5; Putative transcription activator involved in regulating light control of development (788 aa)
           
  0.641
CES101
G-type lectin S-receptor-like serine/threonine-protein kinase CES101; Promotes the expression of genes involved in photosynthesis at least in dedifferentiated calli; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family (850 aa)
       
 
  0.631
LSM6A
Small nuclear ribonucleoprotein family protein; Component of LSM protein complexes, which are involved in RNA processing. Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation by promoting decapping and leading to accurate 5’-3’ mRNA decay. The cytoplasmic LSM1-LSM7 complex regulates developmental gene expression by the decapping of specific development-related transcripts. Component of the nuclear LSM2-LSM8 complex which is involved splicing nuclear mRNAs. LSM2-LSM8 binds directly to the U6 small nuclear RNAs (snRNAs) and is essential for accurate splici [...] (91 aa)
       
 
  0.563
PP2-B13
Phloem protein 2-B13 (PP2-B13); Its function is described as carbohydrate binding; Located in endomembrane system; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), F-box domain, Skp2-like (InterPro-IPR022364); BEST Arabidopsis thaliana protein match is- phloem protein 2-B14 (TAIR-AT1G56250.1); Has 533 Blast hits to 519 proteins in 34 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 533; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (284 aa)
           
  0.523
CERK1
Chitin elicitor receptor kinase 1; Lysin motif (LysM) receptor kinase that functions as a cell surface receptor in chitin elicitor (chitooligosaccharides) signaling leading to innate immunity toward both biotic and abiotic stresses (e.g. tolerance to salinity, heavy-metal stresses, and Botrytis cinerea infection). Recognizes microbe- derived N-acetylglucosamine (NAG)-containing ligands. Involved in the resistance to pathogenic fungi Alternaria brassicicola and Erysiphe cichoracearum, probably by sensing microbe-associated molecular patterns (MAMP) and pathogen-associated molecular patt [...] (617 aa)
       
 
  0.456
TPS21
Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma; Belongs to the terpene synthase family. Tpsa subfamily (547 aa)
           
  0.451
AT5G55690
MADS-box transcription factor family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in nucleus; Expressed in central cell; Contains the following InterPro domains- Transcription factor, MADS-box (InterPro-IPR002100); BEST Arabidopsis thaliana protein match is- AGAMOUS-like 82 (TAIR-AT5G58890.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- [...] (277 aa)
           
  0.430
AT5G27944
MADS-box transcription factor family protein; Its function is described as sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in nucleus; Contains the following InterPro domains- Transcription factor, MADS-box (InterPro-IPR002100); BEST Arabidopsis thaliana protein match is- AGAMOUS-like 89 (TAIR-AT5G27580.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source [...] (224 aa)
           
  0.430
AT5G27810
MADS-box transcription factor family protein; Its function is described as sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in nucleus; Contains the following InterPro domains- Transcription factor, MADS-box (InterPro-IPR002100); BEST Arabidopsis thaliana protein match is- AGAMOUS-like 80 (TAIR-AT5G48670.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (119 aa)
           
  0.430
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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