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F2G19.22 protein (Arabidopsis thaliana) - STRING interaction network
"F2G19.22" - S-ribonuclease binding protein 1 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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F2G19.22S-ribonuclease binding protein 1 (SBP1); Its function is described as zinc ion binding; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Zinc finger, RING-type (InterPro-IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro-IPR017066); BEST Arabidopsis thaliana protein match is- SBP (S-ribonuclease binding protein) family protein (TAIR-AT1G60610.3); Has 1148 Blast hits to 1148 proteins in 158 species- Archae - 2; Bacteria - 4; Metazoa [...] (325 aa)    
Predicted Functional Partners:
RBX1
Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein (142 aa)
           
  0.663
AT3G42830
RING/U-box superfamily protein; Component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complex, which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. The SCF complex plays a crucial role in regulating response to auxin and is essential for growth and development. Through the RING-type zinc finger, seems to recruit the E2 ubiquitination enzyme, to the complex and brings it into close proximity to the substrate (By similarity); Belongs to the RING-box family (115 aa)
           
  0.663
HGO
Homogentisate 1,2-dioxygenase (461 aa)
     
        0.621
RAPTOR2
HEAT repeat ;WD domain, G-beta repeat protein protein; Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutations in this gene have no visible effects on embryo or plant development (1336 aa)
     
      0.548
RAPTOR1
HEAT repeat ;WD domain, G-beta repeat protein protein; Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive; Belongs to the WD repeat RA [...] (1344 aa)
     
      0.548
AT1G27530
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage (174 aa)
       
      0.512
AT1G77550
Tubulin-tyrosine ligases;tubulin-tyrosine ligases; Its function is described as tubulin-tyrosine ligase activity; Involved in protein modification process; Located in chloroplast; Expressed in 18 plant structures; Expressed during 8 growth stages; Contains the following InterPro domains- Tubulin-tyrosine ligase (InterPro-IPR004344); Has 1977 Blast hits to 1869 proteins in 143 species- Archae - 0; Bacteria - 8; Metazoa - 1192; Fungi - 29; Plants - 92; Viruses - 0; Other Eukaryotes - 656 (source- NCBI BLink) (855 aa)
       
      0.509
CUL1
Cullin-1; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Regulator of mitotic processes which plays a role during gametogenesis and embryogenesis. Together with SKP1, RBX1 and a F-box protein, it forms a SCF complex. The functional specificity of this complex depends of the type of F-box protein. SCF(UFO) is implicated in floral organ development. SCF(TIR1) is involved in auxin signaling pathway. SCF(COI1) regulates responses to jasmonates. SCF(EID1) and SCF(AFR) are implicated in phytochrome A light signaling. SCF(ADO1/ZTL), SCF(ADO2/LKP2), SCF(A [...] (738 aa)
     
 
  0.505
AT1G59800
Cullin family protein; Its function is described as ubiquitin protein ligase binding; Involved in ubiquitin-dependent protein catabolic process; Located in cullin-RING ubiquitin ligase complex; Contains the following InterPro domains- Cullin, N-terminal (InterPro-IPR001373), Cullin repeat-like-containing domain (InterPro-IPR016159); BEST Arabidopsis thaliana protein match is- Cullin family protein (TAIR-AT1G59790.1); Has 1434 Blast hits to 1434 proteins in 216 species- Archae - 0; Bacteria - 0; Metazoa - 729; Fungi - 306; Plants - 271; Viruses - 0; Other Eukaryotes - 128 (source- NCBI BLink) (255 aa)
     
 
  0.505
AT1G59790
Putative cullin-like protein 2; Cullin family protein; Its function is described as ubiquitin protein ligase binding; Involved in ubiquitin-dependent protein catabolic process; Located in cullin-RING ubiquitin ligase complex; Expressed in 8 plant structures; Expressed during L mature pollen stage, LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage; Contains the following InterPro domains- Cullin, N-terminal (InterPro-IPR001373), Cullin repeat-like-containing domain (InterPro-IPR016159); BEST Arabidopsis thaliana protein match is- cullin 1 (TAIR-AT4G02570.4) [...] (374 aa)
     
 
  0.505
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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