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AT1G46912 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G46912" - F-box associated ubiquitination effector family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G46912F-box associated ubiquitination effector family protein (312 aa)    
Predicted Functional Partners:
AGL83
AGAMOUS-like 83 (285 aa)
     
        0.438
AT4G15060
Uncharacterized protein (539 aa)
     
        0.438
AT4G03566
Uncharacterized protein (150 aa)
     
        0.438
AT3G32120
Uncharacterized protein (92 aa)
     
        0.438
AT3G30520
Uncharacterized protein (397 aa)
     
        0.438
AT3G29033
Glycine-rich protein (167 aa)
     
        0.438
AT3G28020
Uncharacterized protein (246 aa)
     
        0.438
AT3G17490
Putative F-box protein (388 aa)
     
        0.438
AT2G07200
Cysteine proteinase-like protein (151 aa)
     
        0.438
AT1G47730
Putative F-box protein (391 aa)
     
     
0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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