STRINGSTRING
AT1G47395 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G47395" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G47395Uncharacterized protein (50 aa)    
Predicted Functional Partners:
AT5G04010
F-box protein (287 aa)
           
  0.960
AT1G47400
Uncharacterized protein (50 aa)
     
   
  0.921
AT5G44970
Protein with RNI-like/FBD-like domains (389 aa)
           
  0.777
PDR2
Phosphate deficiency response 2; Mediates manganese transport into the endoplasmic reticulum. The ATPase activity is required for cellular manganese homeostasis (By similarity). Plays an important role in pollen and root development through its impact on protein secretion and transport processes. Functions together with LPR1 and LPR2 in a common pathway that adjusts root meristem activity to phosphate availability. Under phosphate limitation, restricts SHR movement in root meristem and is required for maintaining SCR expression in the root meristem stem-cell niche as well as for proxim [...] (1179 aa)
           
  0.730
At5g57110
Calcium-transporting ATPase 8; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell (1074 aa)
           
  0.677
RMF
REDUCED MALE FERTILITY; Regulates tapetum degeneration and pollen maturation during anther development (354 aa)
           
  0.631
FYPP3
Flower-specific, phytochrome-associated protein phosphatase 3; Dephosphorylates phosphorylated phytochromes, with a preference toward Pfr forms. Plays a major role in the photoperiodic control of flowering time in long days by modulating phytochrome signals in flowering time control (303 aa)
           
  0.473
BHLH100
Transcription factor bHLH100; Plays a role in metal homeostasis. Confers tolerance to high zinc (Zn) and nickel (Ni) (242 aa)
     
        0.436
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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