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DYW1 protein (Arabidopsis thaliana) - STRING interaction network
"DYW1" - DYW domain protein 1 in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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DYW1DYW domain protein 1; Plays a major role in single RNA editing events in chloroplasts. Acts as a site-recognition transacting factor involved in the edition of the site 1 of ndhD (ndhD-1 site corresponding to cytidine-2), which is a plastid-encoded subunit of the NADH-plastoquinone oxidoreductase. The interaction with CRR4 is required for its function in editing the ndhD-1 site (239 aa)    
Predicted Functional Partners:
CRR4
CHLORORESPIRATORY REDUCTION 4; Plays a major role in chloroplast RNA editing. Acts as a site-recognition transacting factor to recruit C-deaminase (PubMed-15662426, PubMed-17015439). Involved in single RNA editing events. Required for the edition of the site 1 of ndhD (ndhD-1 site corresponding to cytidine-2), which is a plastid-encoded subunit of the NADH-plastoquinone oxidoreductase. The interaction with DYW1 is required for its function in editing the ndhD-1 site (PubMed-23001034) (613 aa)
     
 
  0.919
OTP86
ORGANELLE TRANSCRIPT PROCESSING 86; Involved in RNA editing event in chloroplasts. Required for the editing of a single site in rps14 transcript (884 aa)
     
   
  0.821
AT5G54580
RNA recognition motif-containing protein (156 aa)
       
 
  0.754
GR-RBP3
Glycine-rich RNA-binding protein 3; Possibly has a role in RNA transcription or processing during stress (309 aa)
       
 
  0.693
GR-RBP5
Glycine-rich RNA-binding protein 5; Possibly has a role in RNA transcription or processing during stress (By similarity). Binds RNAs and DNAs sequence with a preference to single-stranded nucleic acids. Displays strong affinity to poly(U) sequence (289 aa)
       
 
  0.690
AT3G20930
RNA recognition motif-containing protein (374 aa)
     
 
  0.690
NDHD
NADH-Ubiquinone/plastoquinone (complex I) protein.[Source-TAIR;Acc-ATCG01050] (506 aa)
           
  0.675
MEF20
Mitochondrial editing factor 20 (472 aa)
           
  0.675
ORF114
Hypothetical protein.[Source-TAIR;Acc-ATMG01000] (114 aa)
           
  0.670
GRP4
Glycine-rich RNA-binding protein 4; Possibly has a role in RNA transcription or processing during stress. Binds sequence non-specifically to RNAs and DNAs (136 aa)
       
 
  0.653
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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