STRINGSTRING
AT1G47640 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G47640" - Uncharacterized protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G47640Uncharacterized protein (228 aa)    
Predicted Functional Partners:
PFD5
Prefoldin 5; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (By similarity) (151 aa)
     
        0.776
AT3G57000
Nucleolar essential protein-related (298 aa)
     
        0.734
NAS3
Nicotianamine synthase 3; Synthesizes nicotianamine, a polyamine which serves as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron (320 aa)
           
  0.731
ERF15
Ethylene-responsive transcription factor 15; May act as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity) (243 aa)
           
  0.634
AGL19
AGAMOUS-like 19; Probable transcription factor that promotes flowering, especially in response to vernalization by short periods of cold, in an FLC-inpedendent manner (219 aa)
           
  0.605
AGL44
AGAMOUS-like 44; Probable transcription factor. Required for root plasticity in response to nitrate, NO(3)(-). Promotes lateral root growth in a NRT1.1-dependent manner (234 aa)
           
  0.552
HYD1
HYDRA1; Catalyzes the conversion of Delta(8)-sterols to their corresponding Delta(7)-isomers (223 aa)
     
        0.521
bHLH39
Basic helix-loop-helix 39 (258 aa)
           
  0.504
AT4G08520
Coatomer subunit zeta-3; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity) (181 aa)
     
        0.451
AT3G44330
Uncharacterized protein; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning (565 aa)
     
   
  0.450
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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