STRINGSTRING
AT1G47740 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G47740" - PPPDE putative thiol peptidase family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G47740PPPDE putative thiol peptidase family protein (279 aa)    
Predicted Functional Partners:
AT5G58420
40S ribosomal protein S4-3 (262 aa)
       
 
  0.480
AT3G51350
Aspartyl protease family protein (528 aa)
     
   
  0.477
AT3G49720
Uncharacterized protein (261 aa)
           
  0.473
AT3G01660
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (273 aa)
           
  0.473
AT1G79090
DNA topoisomerase 2-associated protein PAT1 (793 aa)
           
  0.473
emb1688
Embryo defective 1688 (433 aa)
           
  0.473
AT1G06200
Peptidase S24/S26A/S26B/S26C family protein (206 aa)
           
  0.473
AT4G01030
Pentatricopeptide repeat-containing protein (768 aa)
           
  0.449
AT3G10610
40S ribosomal protein S17-3 (140 aa)
           
  0.449
AT1G65230
Uncharacterized protein (286 aa)
           
  0.449
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (19%) [HD]