STRINGSTRING
AT1G47770 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G47770" - Beta-galactosidase related protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G47770Beta-galactosidase related protein (205 aa)    
Predicted Functional Partners:
AT3G32260
Nucleic acid-binding protein-like protein (309 aa)
           
  0.737
AT2G07190
Uncharacterized protein (452 aa)
           
  0.737
AT5G11490
Adaptin family protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (By similarity) (850 aa)
           
  0.680
AT1G31730
Adaptin family protein; Subunit of novel type of clathrin- or non-clathrin- associated protein coat involved in targeting proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system (938 aa)
           
  0.679
AT2G19790
AP-4 complex subunit sigma; Subunit of novel type of clathrin- or non-clathrin- associated protein coat involved in targeting proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system (143 aa)
           
  0.677
AT4G14160
Sec23/sec24-like transport protein (773 aa)
           
  0.673
SCAMP5
SCAMP family protein; Probably involved in membrane trafficking (264 aa)
           
  0.672
AT4G38070
Basic helix-loop-helix domain-containing protein (1513 aa)
           
  0.671
AT3G01340
transducin/WD-40 repeat-containing protein; Required for protein transport from the endoplasmic reticulum to the Golgi apparatus (302 aa)
           
  0.670
AT5G12240
Uncharacterized protein (168 aa)
           
  0.641
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (9%) [HD]