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AT1G47780 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G47780" - alpha/beta-Hydrolases superfamily protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
AT1G47780alpha/beta-Hydrolases superfamily protein; Its function is described as hydrolase activity; Involved in biological_process unknown; Located in cellular_component unknown; Contains the following InterPro domains- Phospholipase/carboxylesterase (InterPro-IPR003140); BEST Arabidopsis thaliana protein match is- alpha/beta-Hydrolases superfamily protein (TAIR-AT1G47786.1); Has 704 Blast hits to 704 proteins in 205 species- Archae - 0; Bacteria - 171; Metazoa - 288; Fungi - 41; Plants - 125; Viruses - 0; Other Eukaryotes - 79 (source- NCBI BLink) (126 aa)    
Predicted Functional Partners:
WAV2
Alpha/beta-Hydrolases superfamily protein; Encodes a Bem46-like protein. WAV2 negatively regulates root bending when roots alter their growth direction. It’s not involved in sensing environmental stimuli (e.g. gravity, light, water, touch) (308 aa)
         
  0.503
RKP
E3 ubiquitin-protein ligase RKP; Encodes a protein predicted to act as a RING E3 ubiquitin ligase. It appears to regulate the stability of the KRP1/ICK1 cyclin dependent kinase inhibitor. Induced by beet severe curly virus (BSCTV) C4 protein (1283 aa)
           
  0.439
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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