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AT1G47810 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G47810" - F-box and associated interaction domains-containing protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G47810F-box and associated interaction domains-containing protein; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), F-box domain, Skp2-like (InterPro-IPR022364), F-box associated domain, type 3 (InterPro-IPR013187), F-box associated interaction domain (InterPro-IPR017451); BEST Arabidopsis thaliana protein match is- F-box and associated interaction domains-containing protein (TAIR-AT1G47800.1); Has 1083 Blast hits to 1020 proteins in 37 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1083; Viruses - 0; Other Eukaryotes - 0 (source- [...] (351 aa)    
Predicted Functional Partners:
AT1G27250
Paired amphipathic helix (PAH2) superfamily protein; Its function is described as molecular_function unknown; Involved in regulation of transcription, DNA-dependent; Located in nucleus; Contains the following InterPro domains- Paired amphipathic helix (InterPro-IPR003822); BEST Arabidopsis thaliana protein match is- paired amphipathic helix repeat-containing protein (TAIR-AT1G27220.1); Has 603 Blast hits to 572 proteins in 159 species- Archae - 0; Bacteria - 0; Metazoa - 198; Fungi - 151; Plants - 225; Viruses - 0; Other Eukaryotes - 29 (source- NCBI BLink) (137 aa)
     
        0.434
AT5G37473
Encodes a defensin-like (DEFL) family protein (73 aa)
     
        0.431
AT3G25750
Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), Protein of unknown function DUF295 (InterPro-IPR005174); BEST Arabidopsis thaliana protein match is- F-box family protein with a domain of unknown function (DUF295) (TAIR-AT2G26160.1); Has 337 Blast hits to 336 proteins in 11 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 337; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (348 aa)
     
        0.426
AT3G56520
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; Its function is described as sequence-specific DNA binding transcription factor activity; Involved in multicellular organismal development, regulation of transcription; Contains the following InterPro domains- No apical meristem (NAM) protein (InterPro-IPR003441); BEST Arabidopsis thaliana protein match is- NAC domain containing protein 95 (TAIR-AT5G41090.1); Has 1738 Blast hits to 1735 proteins in 61 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1738; Viruses - 0; Other Eukaryotes - 0 [...] (175 aa)
     
        0.424
AT3G45248
Encodes a ECA1 gametogenesis related family protein (114 aa)
     
        0.424
AT1G26798
Plant self-incompatibility protein S1 family; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Contains the following InterPro domains- Plant self-incompatibility S1 (InterPro-IPR010264); BEST Arabidopsis thaliana protein match is- Plant self-incompatibility protein S1 family (TAIR-AT1G26797.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (151 aa)
     
        0.424
AT4G08530
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members- At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15 (103 aa)
     
        0.424
AT1G26796
Plant self-incompatibility protein S1 family; Located in endomembrane system; Contains the following InterPro domains- Plant self-incompatibility S1 (InterPro-IPR010264); BEST Arabidopsis thaliana protein match is- Plant self-incompatibility protein S1 family (TAIR-AT1G26795.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (151 aa)
     
        0.424
AT1G43666
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Its function is described as molecular_function unknown; Involved in lipid transport; Located in endomembrane system; Contains the following InterPro domains- Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro-IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro-IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro-IPR013770); BEST Arabidopsis thaliana protein match is- Bifunctional inhibitor/lipid [...] (96 aa)
     
        0.422
AT4G22430
Putative F-box/kelch-repeat protein At4g22430; F-box family protein; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), F-box domain, Skp2-like (InterPro-IPR022364); BEST Arabidopsis thaliana protein match is- Galactose oxidase/kelch repeat superfamily protein (TAIR-AT3G26010.1); Has 117 Blast hits to 117 proteins in 7 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (427 aa)
     
        0.422
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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