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AT1G47810 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G47810" - F-box protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G47810F-box protein (351 aa)    
Predicted Functional Partners:
AT5G39230
TFIIB zinc-binding protein (119 aa)
     
        0.438
NGA4
NGATHA4; Regulates lateral organ growth. Functionally redundant with NGA1, NGA2 and NGA3 (333 aa)
     
        0.437
AT2G42470
TRAF-like family protein (898 aa)
     
        0.437
AT1G27240
Paired amphipathic helix repeat-containing protein (186 aa)
     
        0.437
AT4G39760
Putative F-box/kelch-repeat protein (369 aa)
     
        0.436
AT2G27700
Putative translation initiation factor IF-2 (480 aa)
     
        0.436
AT2G21420
IBR domain containing protein (468 aa)
     
        0.436
SON1
SUPPRESSOR OF NIM1-1 1; Regulates negatively a plant defense signaling pathway which is independent of salicylic acid (SA) and systemic acquired resistance (SAR). Confers sensitivity to P.syringae and P.parasitica (370 aa)
     
        0.436
MYB22
Myb domain protein 22 (256 aa)
     
        0.435
AT5G36680.1
Uncharacterized protein (333 aa)
     
        0.435
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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