STRINGSTRING
AT1G47900 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G47900" - Filament-like plant protein 6 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G47900Filament-like plant protein 6 (1054 aa)    
Predicted Functional Partners:
AT3G52110
Uncharacterized protein (362 aa)
     
        0.572
DAR2
DA1-related protein 2; Ubiquitin receptor that probably regulates developmental process (528 aa)
     
        0.545
AT1G76400
Ribophorin I; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (614 aa)
     
        0.537
AT1G19170
Pectin lyase-like protein (506 aa)
     
        0.491
AT5G15510
TPX2 (targeting protein for Xklp2) family protein (519 aa)
     
        0.467
AT3G06340
DnaJ domain-containing protein (673 aa)
     
        0.461
FRS3
FAR1-related protein; Putative transcription activator involved in regulating light control of development (851 aa)
     
        0.461
CYCB1;4
Cyclin B1;4 (387 aa)
     
        0.450
AT5G52950
Uncharacterized protein (948 aa)
     
        0.436
AT5G37010
Uncharacterized protein (637 aa)
     
        0.436
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (11%) [HD]