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AT1G47900 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G47900" - Plant protein of unknown function in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G47900Plant protein of unknown function (DUF869); Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in plasma membrane; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Protein of unknown function DUF869, plant (InterPro-IPR008587); BEST Arabidopsis thaliana protein match is- Plant protein of unknown function (DUF869) (TAIR-AT1G19835.2); Has 79140 Blast hits to 41205 proteins in 2472 species- Archae - 1127; Bacteria - 12072; Metazoa - 37984; Fungi - 6739; Plants - 4292; Viruses [...] (1054 aa)    
Predicted Functional Partners:
GH9B5
Glycosyl hydrolase 9B5 (GH9B5); Its function is described as hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; Involved in carbohydrate metabolic process; Located in endomembrane system; Expressed in 18 plant structures; Expressed during 11 growth stages; Contains the following InterPro domains- Six-hairpin glycosidase (InterPro-IPR012341), Glycoside hydrolase, family 9, active site (InterPro-IPR018221), Six-hairpin glycosidase-like (InterPro-IPR008928), Glycoside hydrolase, family 9 (InterPro-IPR001701); BEST Arabidopsis thaliana protein match is- glycosyl hydr [...] (515 aa)
     
        0.899
At4g35830
Aconitate hydratase 1; Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. This enzyme can also specifically bind to the 5’ UTR of CSD2 in vitro; Belongs to the aconitase/IPM isomerase family (898 aa)
           
  0.561
T3P4.5
Aconitate hydratase 2, mitochondrial; Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5’ UTR of CSD2 in vitro; Belongs to the aconitase/IPM isomerase family (995 aa)
           
  0.561
ACO3
Aconitate hydratase 3, mitochondrial; Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5’ UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its [...] (990 aa)
           
  0.561
PMM
Phosphomannomutase; Involved in ascorbic acid biosynthesis and in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions; Belongs to the eukaryotic PMM family (246 aa)
           
  0.533
AT3G58610
Ketol-acid reductoisomerase, chloroplastic; Ketol-acid reductoisomerase; Contains the following InterPro domains- Acetohydroxy acid isomeroreductase, catalytic (InterPro-IPR013116), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro-IPR008927), Dehydrogenase, multihelical (InterPro-IPR013328), Acetohydroxy acid isomeroreductase C-terminal (InterPro-IPR000506), Ketol-acid reductoisomerase (InterPro-IPR016206), Acetohydroxy acid isomeroreductase (InterPro-IPR013023), NAD(P)-binding domain (InterPro-IPR016040) (591 aa)
     
   
  0.461
DAR2
DA1-related protein 2; Ubiquitin receptor that probably regulates developmental process (528 aa)
     
        0.407
AT1G76400
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (614 aa)
     
        0.405
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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