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AT1G47940 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G47940" - Pentatricopeptide repeat-containing protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G47940Pentatricopeptide repeat-containing protein (280 aa)    
Predicted Functional Partners:
AT1G57720
Elongation factor EF-1 gamma subunit; Probably plays a role in anchoring the complex to other cellular components (413 aa)
       
      0.734
AT1G09640
Elongation factor EF-1 gamma subunit; Probably plays a role in anchoring the complex to other cellular components (414 aa)
       
      0.734
SBE2.2
Starch branching enzyme 2.2; Catalyzes the formation of the alpha-1,6-glucosidic linkages in starch by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position (805 aa)
       
      0.603
EMB2729
EMBRYO DEFECTIVE 2729; Catalyzes the formation of the alpha-1,6-glucosidic linkages in starch by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Essential during embryogenesis (899 aa)
       
      0.603
SBE2.1
Starch branching enzyme 2.1; Catalyzes the formation of the alpha-1,6-glucosidic linkages in starch by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position (858 aa)
       
      0.603
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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