STRINGSTRING
AT1G47980 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G47980" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G47980Uncharacterized protein (315 aa)    
Predicted Functional Partners:
FAR2
MALE STERILITY 2; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Involved in the synthesis of the lipid component in sporopollenin (616 aa)
     
        0.471
TSM1
Putative caffeoyl-CoA O-methyltransferase; Methyltransferase involved in phenylpropanoid polyamine conjugate biosynthesis. In vivo, methylates only one of the 5- hydroxyferuloyl moieties of N1,N5,N10-tri-(hydroxyferuloyl)- spermidine, while is able in vitro to convert all three 5- hydroxyferuloyl residues to the corresponding sinapoyl moieties and to methylate caffeoyl CoA and tricaffeoyl spermidine (233 aa)
     
        0.470
A7
ANTHER 7 (180 aa)
     
        0.463
GRP17
Glycine rich protein 17; Lipid-binding oleosin pollen coat protein required to mediate pollen recognition by stigma cells and subsequent pollen hydration (543 aa)
     
        0.461
CYP86C3
Member of CYP86C (534 aa)
     
        0.456
ATA27
Beta-glucosidase 20 (535 aa)
     
        0.448
AT2G03740
Late embryogenesis abundant domain-containing protein (189 aa)
     
        0.446
MYB99
Myb domain protein 99 (245 aa)
     
        0.444
LBD2
LOB domain-containing protein 2 (206 aa)
     
        0.444
KCS15
3-ketoacyl-CoA synthase 15 (451 aa)
     
        0.440
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (7%) [HD]