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AT1G48095 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G48095" - Nucleic acid-binding/zinc ion-binding protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
AT1G48095Nucleic acid-binding/zinc ion-binding protein; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G36960.1); Has 82 Blast hits to 82 proteins in 3 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (303 aa)    
Predicted Functional Partners:
AT5G26360
TCP-1/cpn60 chaperonin family protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin; Belongs to the TCP-1 chaperonin family (555 aa)
     
 
  0.994
AT5G20890
TCP-1/cpn60 chaperonin family protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin (527 aa)
     
 
  0.994
TCP-1
T-complex protein 1 alpha subunit; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin (545 aa)
     
 
  0.994
AT3G11830
TCP-1/cpn60 chaperonin family protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin; Belongs to the TCP-1 chaperonin family (557 aa)
     
 
  0.994
AT3G18190
TCP-1/cpn60 chaperonin family protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin (536 aa)
     
 
  0.994
AT1G67760
TCP-1/cpn60 chaperonin family protein; Its function is described as unfolded protein binding, ATP binding; Involved in response to salt stress; Located in cellular_component unknown; Expressed in 14 plant structures; Expressed during 8 growth stages; Contains the following InterPro domains- Chaperonin Cpn60/TCP-1 (InterPro-IPR002423), T-complex protein 1, epsilon subunit (InterPro-IPR012718); BEST Arabidopsis thaliana protein match is- TCP-1/cpn60 chaperonin family protein (TAIR-AT1G24510.1); Has 1127 Blast hits to 982 proteins in 329 species- Archae - 446; Bacteria - 0; Metazoa - 192; [...] (120 aa)
     
 
  0.992
AT1G24510
TCP-1/cpn60 chaperonin family protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin; Belongs to the TCP-1 chaperonin family (535 aa)
     
 
  0.992
AT5G16070
TCP-1/cpn60 chaperonin family protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin (535 aa)
     
 
  0.991
AT3G02530
TCP-1/cpn60 chaperonin family protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin (535 aa)
     
 
  0.991
AT2G46290
Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (355 aa)
     
   
  0.939
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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